| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2324 |
|---|
| Symbol | |
|---|
| ID | 4180054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2477470 |
|---|
| End bp | 2478453 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638068217 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_674877 |
|---|
| Protein GI | 110634669 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCA CTCACCAGCA ATCGGAAGCG ATCCGGCGCG GCGCGCGCAT GCTGCGCACG
GCGCTTGGAC CTGCCATCGC CCGATTTCTG GAAGATCCCA CAATCGTCGA AGTGATGCTC
AACCCCGACG GCCGCCTGTG GGTCGATCGT CTGGTGCAAG GGCTTGCCGA CACCGGCGAG
CGGCTGCCCG CCGCTGACGG CGAGCGCATC GTGCGCCTGG TCGCACATCA CGTCGGCGTA
GAGGTGCATC CCCGAAGCCC CCGTGTGTCG GCGGAGCTTC CCGAGACGGG GGAGCGGTTC
GAGGGCTTGT TGCCGCCAGT CGTGATGGCT CCGGCCTTCG CGATCCGGAA ACCTGCCGTC
GCGGTCTTCA CCCTCAACGA TTATATCGCC GCCGGCATCA TGTCGGCGGA TCAGGCCGCA
GTTCTCCGTC GGGCCGTTAT CGGGCGCGAG AACATACTTG TCGCAGGCGG CACCTCGACC
GGCAAGACGA CGCTGACCAA CGCGTTGCTG GCCGAGGTAG CGAAGGGTGC TGATCGCGTC
GTCATCATCG AGGATACGCG CGAACTGCAA TGCGCCGCGC CCAACCTCGT CGCCATGCGT
ACGAAGGACG GCGTCGCCAC GCTCTCCGAT CTGGTCCGTT CCTCGCTTCG TCTCAGGCCC
GACCGCATCC CGATCGGCGA GGTGCGAGGG AGCGAAGCGC TCGACCTTCT CAAGGCATGG
GGCACTGGCC ATCCCGGCGG CATCGGCACC ATCCATGCCG GCACCGGCAT CGGCGCGCTG
CGCCGGCTCG AGCAGCTCAT CCAGGAAGCC GTCGTCACCG TTCCGCGCGC TCTGATCGCC
GAGACGATCG ATCTCGTTGC CGTGCTCTCC GGCCGTGGCG GCTCGCGCCG GCTTGCCGAG
CTGGCCCGCG TCGAAGGGCT CGGACCGGAC GGCGACTACC GCATCACCCC AGCAGACCCG
AACCGTACAG GAGACCCATC ATGA
|
|---|
| Protein sequence | MAATHQQSEA IRRGARMLRT ALGPAIARFL EDPTIVEVML NPDGRLWVDR LVQGLADTGE
RLPAADGERI VRLVAHHVGV EVHPRSPRVS AELPETGERF EGLLPPVVMA PAFAIRKPAV
AVFTLNDYIA AGIMSADQAA VLRRAVIGRE NILVAGGTST GKTTLTNALL AEVAKGADRV
VIIEDTRELQ CAAPNLVAMR TKDGVATLSD LVRSSLRLRP DRIPIGEVRG SEALDLLKAW
GTGHPGGIGT IHAGTGIGAL RRLEQLIQEA VVTVPRALIA ETIDLVAVLS GRGGSRRLAE
LARVEGLGPD GDYRITPADP NRTGDPS
|
|---|
| |