| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1150 |
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| Symbol | |
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| ID | 4180741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 1256494 |
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| End bp | 1259031 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638067034 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_673711 |
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| Protein GI | 110633503 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTCA CCACCTATCG CAGGAAGCGG AACTTTTCAG CTACGCCCGA GCCTCCGGGT
GAGGAGAAGG CTTCGCCGCG CGGCGATAGT TTCGTGATCC AAAAGCACGC CGCGCGCCGC
CTTCATTACG ATCTTCGGCT GGAGATGGAT GGGGTTCTCA AGAGTTGGGC GGTCACGCGC
GGGCCGAGTC TCGTGCCGGG CGAAAAGCGG CTTGCCGTCC ATGTGGAGGA TCACCCGCTC
GATTATGGCG ATTTCGAAGG GACCATTCCC AAGGGCGAAT ATGGCGGCGG GACCGTTATC
GTCTGGGACC GCGGAAGCTG GTCTCCGATC GGTGATGCGA AAAAGGGTTA TGCCAAGGGC
CATCTGGAAT TCGAATTGCA CGGCGAGAAG CTGACGGGCC GCTGGCATCT GGTGCGCATG
GCGAAGAAGC CGCGCGAGAA GAAGGAAAAC TGGCTGCTCA TTAAGGGCGA GGACGATGCC
GCGCGCAGCG AGGCTGATCC GGATATTCTG GAGGAGCGCC CGGAGTCGGT GAAAACCGGA
CGGGTGATCG AAGAGGTGGA AGGCGAGGCG CCGGGCTGGT CGTCGAAGAC CGGGCGGATC
GAGCAGCCGG CGGAGGCAAA ACCGGCGCGG AAGAAGCGCG CGACCAAGGC CGGTAGCGAG
AAATCCGCTG GCGAGAAAAT TTCGGTACCC AAGCGGGCGA AGAAAGCGGG CTATCCCGGC
TTCATAGAGC CGGCGCTCGC CACATTGCGC AGCACGCCTC CGCCCGGCGG CAGGTGGTTG
CACGAGATCA AGTTCGACGG CTATCGGCTG CAAGCGCATA TCCGCGACGG CAAAGCGCGG
CTATTGACGC GCAGCGGCCT CGACTGGACC GAAAAATTTG GGGACGCGAT CGTGACCGCC
TTGGGCAGCC TTCCCGTCCG GCAGGCCATT ATGGACGGAG AACTGATCGT GGAGGGAGCG
GGCGGCGCTT CGGACTTCTC CGCCCTCCAG GCAGCGCTAT CCGAAGGTCG CGTCGACCGC
ATGGCGCTCT ATCTGTTCGA CCTGCTCTAT CTTGACGGCT ACGACTTCCG CCCCGTTCCG
CTGGCTGAGA GAAAAGCCAC CCTCCAGAAG CTCCTCGATG GCGCGCCACC AGTCCTGCGC
TACAGCGAGC ATTTCGAAGA GGATGGCGAG CTTGTTTTCC GCCATGCCTG CCGCCTGAGT
CTTGAAGGCA TTGTCTCGAA GGCCGGCGAT GCGGCCTATC GTTCCGGGCG CGGCAAGGAT
TGGATCAAGT CGAAATGTTC CATGCGGCAG GAGTTCGTCG TCGCGGGTTA CGTGCCATCC
ACCACCTCCA ACCGCGCCAT CGGTTCACTG GTGCTGGGCT ATTATGAAAA CGAGCGGTTG
ATATATGCCG GCCGTGTCGG CACCGGCTTC AGCCATGCGC TTGCGCAGGA TCTTTTCAAG
CGTCTGGATA AAATGCGCAT CGCGAAAAGC CCCTTCGCAA AGAAGCTGAC GTCTGAAGAA
GCGCGCGGCG CGAAATTCGT GCGGCCCGAG CTCGTGGCGG AAGTGGAGTT TCGGACTTGG
ACAGCCGACA ACTTGATCCG CCATGCCTCC TTCCGGGGTC TGCGGGAGGA TAAAAGCGCG
ACGGATGTCA CCCGCGAGAC GAACCAATCC AAGCCCGCCG AGCGCGCGGC GCCTGCAATC
AGGCTTACGC ACCCGGACCG GATTTACTGG AAGGATGCCG GTGTCACCAA GCAGGGGCTC
TCGGACTATT ATGCGGAAGT CTGGCCGCGC ATGGGTCCTT TCATCGTCAA TCGTCCGCTG
GCGCTTGTGC GCTGTCCCGA TGGTGTTGAG GGCCAGTGCT TCTTTCAGAA GCATGCCTGG
CGCGGTCAAT CCCACGAGAT CATGAAAGCC GTAGACCCGG AGGACGACGA GCCCATTATC
GCCATCGATG GTCTGCCGGG CCTGATAGGG CTTGTGCAGG GCGGCACGCT GGAGATCCAC
CCGTGGGGAT CGCAACTGGA GGATCTGGAG CGCCCCGACC TCATTAATAT GGACCTTGAT
CCTGGCCCGG ATGTCACCTG GCAGGACGTG ATCGATGCCG CAAGGGAGGT GCGCGAGCGG
CTGGCGCAAG CGGGCCTTGA AAGCTTTGTG AAGACGTCCG GCGGCAAGGG CCTGCATGTT
GTGGCGCCGC TGAAGCCGCG CGCGGATTGG CCTGAGGTGA AGGCCTTCGC AAAGGGCATC
GCCGATGCGA TGGCTTCCGA CACACCCGAG CGCTTCGTTG CCACCGTGAC GAAAGCCAAG
CGCAAGGGAA AGATCCTTGT CGACTATCTT CGCAACGGCA GGGGGGCGAC GGCCGTCGCA
CCCTATTCCA CACGGGCGCG GGCGGGGGCG GCGGTGTCGA TGCCGCTGTT CTGGGAGGAA
CTGAGCCCCG CCATCACCGC CGATTATTTT ACCGTGGCCA ATGCTCCAAC ACGTTTGGCC
GCCATTGGGA AGGACCCGTG GGAGGATTTT TGGCGGGCGG CGGTGCCGCT TGGCAGGAAG
GCGCGCCGCG CCGCGTGA
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| Protein sequence | MALTTYRRKR NFSATPEPPG EEKASPRGDS FVIQKHAARR LHYDLRLEMD GVLKSWAVTR
GPSLVPGEKR LAVHVEDHPL DYGDFEGTIP KGEYGGGTVI VWDRGSWSPI GDAKKGYAKG
HLEFELHGEK LTGRWHLVRM AKKPREKKEN WLLIKGEDDA ARSEADPDIL EERPESVKTG
RVIEEVEGEA PGWSSKTGRI EQPAEAKPAR KKRATKAGSE KSAGEKISVP KRAKKAGYPG
FIEPALATLR STPPPGGRWL HEIKFDGYRL QAHIRDGKAR LLTRSGLDWT EKFGDAIVTA
LGSLPVRQAI MDGELIVEGA GGASDFSALQ AALSEGRVDR MALYLFDLLY LDGYDFRPVP
LAERKATLQK LLDGAPPVLR YSEHFEEDGE LVFRHACRLS LEGIVSKAGD AAYRSGRGKD
WIKSKCSMRQ EFVVAGYVPS TTSNRAIGSL VLGYYENERL IYAGRVGTGF SHALAQDLFK
RLDKMRIAKS PFAKKLTSEE ARGAKFVRPE LVAEVEFRTW TADNLIRHAS FRGLREDKSA
TDVTRETNQS KPAERAAPAI RLTHPDRIYW KDAGVTKQGL SDYYAEVWPR MGPFIVNRPL
ALVRCPDGVE GQCFFQKHAW RGQSHEIMKA VDPEDDEPII AIDGLPGLIG LVQGGTLEIH
PWGSQLEDLE RPDLINMDLD PGPDVTWQDV IDAAREVRER LAQAGLESFV KTSGGKGLHV
VAPLKPRADW PEVKAFAKGI ADAMASDTPE RFVATVTKAK RKGKILVDYL RNGRGATAVA
PYSTRARAGA AVSMPLFWEE LSPAITADYF TVANAPTRLA AIGKDPWEDF WRAAVPLGRK
ARRAA
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