Gene Meso_0376 details

Gene Information

• Locus tag: Meso_0376
• ID: 4182054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 418279
• End bp: 420108
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638066258
• Product: putative inner membrane protein translocase component YidC
• Protein accession: YP_672945
• Protein GI: 110632737
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.388979
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACA ATCGCAATCT CCTCATCACA ATCGCGCTGT CGGTGGTTAT CCTGACGCTT 
TGGCAGGTGT TCTACGTCAA CCCGCGCGTC GATGCCCAGC GCGAGGCCGC CCAGATCGAG 
GCGCAGCGCG CGCAGGAGAC TGAGGAGAAA CTGGGCACGC AGGGCGCGGA TATTCCTGCC 
CCCGGTGCCA CCCCAGGCAG CACGGCGGTC CCCGGTTCCG CAATTCCGCG AACGCAGGTC 
ACCCGCCAGG AGGCACTTGC CGGTGCTGAG CGTGTGACGA TCGATACTCC CCGTCTTGCA 
GGCACCATCA ACCTGGCGGG CGCACGTTTG GACGACCTGC TGCTCAAGGA TTACAGGGTC 
ACCGTTGACA AGGACTCGCC CAATATCGAT TTGCTGGGCC CCGCAGGCCT TCCCGAGGGA 
TATTTTGTCG AGGTGGGTTA TACCGGCAAT GCGTCGACCG GTGCGGTTCC CGGTCCTGAT 
ACCGTCTGGC AGCTGCAGGA GGGCTCGACG CTCTCGCCCG GAAGCCCGGT CACACTGAGC 
TTCACGAACG ACCGCGGCCT CACCTTCCTG CGCACCTTCG CGGTGGACGA AAATTATCTC 
TTCACGATTA CCGATACGAT CCGGAACGCG GCCGGCGAGC CGGTCGAGAT CCGCAATTAC 
GGCCGCACCA CGCGCTTCGG CCAGCCGAAG ACGGCCGGCA TTTACATCCT GCATGAAGGC 
TTCATCGGCG TTCTTGGCGA GGAAGGTCTT CGCGAAGTGG ATTATTCGAC GGCCCAGGAG 
GATGGGCAGG TTCTGCCCGG CAAGTCCGCC GATGGCTGGC TGGGCATCAC CGACAAGTAC 
TGGGCCGTGA CCATGGTCCC GCGCGCGCAA AAGGATTTCG AGCCGCGCTT TGCCTATTTC 
TCGGACGGCC GGGAGCGCTA CCAGGCGGAT TACCTGACCG ATCCGGTCAC GGTCGCGCCG 
GGCGGCGAGG CCAAGATCGA GACGCTCGTC TTCGCCGGGG CAAAGGAGGT GCATGTCGTC 
GATGCCTATG AGACGCAGCA CAACATCCGC CAATTCGAGC TTCTGATCGA CTGGGGCTGG 
TTCTACTTCA TCACCAAGCC CATGTTCTAC CTGATCGACT GGCTCTTCAG GCTGCTCGGC 
AATTTCGGTG TCGCCATCCT GGCCACCACC GTCTTCGTCA AGCTCGTCTT CTTCCCGCTC 
GCCAACAAGT CCTACAAATC CATGGCGAAC ATGAAGAAGG TTCAGCCGGC GCTGCTCGAG 
ATCCGCGAGA AATATGCGGA CGACAAGATG AAGCAGCAGC AGGCGATGAT GGAGCTCTAC 
AAGAAGGAGA AGATCAACCC GCTCGCGGGC TGCTGGCCGA TCCTTATCCA GATCCCGGTC 
TTTTTCGCGC TCTACAAGGT GCTTTACGTG ACGATCGAGA TGCGTCACGC GCCCTTCTTC 
GGCTGGATTC AGGACCTGTC GGCGCCGGAC CCGACGACGA TCTTCAACCT CTTTGGATTG 
CTGCCTTTCG ATCCGTCGCA GGTTCCTGTC TTTGGACCGT TCCTGATGCT GGGCGTCTGG 
CCGATCATCA TGGGCATCAC CATGTTCCTG CAAATGCGCA TGAACCCGAC GCCGCCGGAT 
CCAACGCAGG CCATGATCTT CAACTGGATG CCGGTAATCT TCACCTTCAT GCTGGCGACC 
TTCCCAGCCG GCCTGGTGAT CTACTGGGCA TGGAACAACC TGCTCTCCAT CATCCAGCAG 
GGCGTGATCA TGAAGCGCCA GGGCGCCAAG ATCGAGCTGT GGGACAATAT GGTGAACCTG 
TTCCGGCGAA AGCCGAAACC GGCGGAATAA 

 

Protein sequence

MENNRNLLIT IALSVVILTL WQVFYVNPRV DAQREAAQIE AQRAQETEEK LGTQGADIPA 
PGATPGSTAV PGSAIPRTQV TRQEALAGAE RVTIDTPRLA GTINLAGARL DDLLLKDYRV 
TVDKDSPNID LLGPAGLPEG YFVEVGYTGN ASTGAVPGPD TVWQLQEGST LSPGSPVTLS 
FTNDRGLTFL RTFAVDENYL FTITDTIRNA AGEPVEIRNY GRTTRFGQPK TAGIYILHEG 
FIGVLGEEGL REVDYSTAQE DGQVLPGKSA DGWLGITDKY WAVTMVPRAQ KDFEPRFAYF 
SDGRERYQAD YLTDPVTVAP GGEAKIETLV FAGAKEVHVV DAYETQHNIR QFELLIDWGW 
FYFITKPMFY LIDWLFRLLG NFGVAILATT VFVKLVFFPL ANKSYKSMAN MKKVQPALLE 
IREKYADDKM KQQQAMMELY KKEKINPLAG CWPILIQIPV FFALYKVLYV TIEMRHAPFF 
GWIQDLSAPD PTTIFNLFGL LPFDPSQVPV FGPFLMLGVW PIIMGITMFL QMRMNPTPPD 
PTQAMIFNWM PVIFTFMLAT FPAGLVIYWA WNNLLSIIQQ GVIMKRQGAK IELWDNMVNL 
FRRKPKPAE