| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4339 |
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| Symbol | |
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| ID | 4178519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 242071 |
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| End bp | 243243 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638059234 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_665956 |
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| Protein GI | 110347138 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.350964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATA CGCCAGAAAC ATCGATCCCC GGCGAACGCG GTCAGACCTC GGCGGCACGC
AAGGTCGACA GCAATCCCTT GCTCAAGCGA GGCGCGGTCG TGCTGGCGGT CGTCGCCTTC
ATGGGTTTCG CCATGTGGTC GATGCGCCAG GGGCCGAAGG AGGACGTCGA GCAGCCGGGA
TCGGGAGTGA TCCGTCAGAC GACGGAGTTC GAACCGGCCC GGGCCGAACC CGAGCCCGTG
GCCCTGCCAG TTCCCGAGAT CAAACTACCG ACGCCGGCCG TCGAGACGGC GGAGACGCCC
CCGGTCGATG AACTGCTCGA TGCGGCAAGA CGGGCGCCGG TGATGGCCTT TGGCGGCGGT
CAGTCCGGCA ACAATGCCAG GCCTTCCAAT ACGGGCGACG CGACGACCGA TCCAAACTTC
GTCCCGGTTG ACGGCCTCCT GGGAGGAGGG GGGCAGGGCG AGAACGAGGA TCAGCGCTTC
AACCGGATGC TGAAGCCAAC TGTCCTGGAA GGATCGAAGG CCGGACATCT CGGCAACCGG
AACTTCATCG TGGCGATGGG GACCTCGATC CCCTGCGCGC TCGAAACCGC GCTGTCATCC
GATCAGCCGG GATTCACCAG TTGCGTGATT ACCCGAGATA TTCTCTCCGA CAACGGCCGG
GTCGTGCTGA TGGAGAAAGG CACCCAGGTC GTGGGCGAAT ATCGTGGCGG ACTGCGCCGC
GGCCAAAGCC GGTTGTTCGT GCTCTGGAAC CGAGCCAAGA CGCCCACAGG CGTCATCATC
ACATTGGCCT CGCCGGCAAC CGATGCGATC GGCCGGGCTG GCTTTGATGG TTACGTCGAT
ACGCATTGGT GGGAGCGCTT CGGAAGCGCG CTACTTCTGT CGGTGGTCGG CGATATTGCC
ACCTATGCCG GTCAGGAACT ACAGCGCAGT GATGTGCAGG CGCAGGGCAC GACAAGCGCC
GGCAAAGACG CCGCCGCGAT CGCCGTCGAG CAGTCCATCA ACATTCCGCC AACGCTCATG
AAGCACCAGG GGTCACTCGT TTCGATCTTC GTGGCGCGCG ATCTCGATTT CTCAAGCATC
TATGGTCTGC GGGTCACCGA GCCGCGCAAC ACGATCTACG ACCGCGCCGT GATAGGCGAC
TTCTATCCAA AATCCGATTT GGTCACGAAA TAG
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| Protein sequence | MTDTPETSIP GERGQTSAAR KVDSNPLLKR GAVVLAVVAF MGFAMWSMRQ GPKEDVEQPG
SGVIRQTTEF EPARAEPEPV ALPVPEIKLP TPAVETAETP PVDELLDAAR RAPVMAFGGG
QSGNNARPSN TGDATTDPNF VPVDGLLGGG GQGENEDQRF NRMLKPTVLE GSKAGHLGNR
NFIVAMGTSI PCALETALSS DQPGFTSCVI TRDILSDNGR VVLMEKGTQV VGEYRGGLRR
GQSRLFVLWN RAKTPTGVII TLASPATDAI GRAGFDGYVD THWWERFGSA LLLSVVGDIA
TYAGQELQRS DVQAQGTTSA GKDAAAIAVE QSINIPPTLM KHQGSLVSIF VARDLDFSSI
YGLRVTEPRN TIYDRAVIGD FYPKSDLVTK
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