| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3811 |
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| Symbol | |
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| ID | 4175591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4596675 |
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| End bp | 4598318 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056839 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_663365 |
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| Protein GI | 109900110 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.12372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATA CAACGGTACT GCATAGCTTA TTTGCAGGTA ACGAAGCGCA CCCTGATAAG
CCCATGTTCC ATCAACCAAT CGACCGCCAA TGGCATACCT ACACATGGGC CGAAGTGACT
GAGCAGGCCA AGCGCATTGC TCAAGGCTTA CGCGCTCAAG GTTTCGAAAA AGGCGATCGT
ATTGTCATTA TGTCGAAAAA CTGTGCTGAG TGGATCATCG CTGACTTCGC CATTGCTATG
GCGGGGATGG TCAGTGTGCC GATTTATGCC ACCGCAGGGG TGAATATTAT CGAGCACGTG
ATTAATCACA GCGGCGCAAA AGCGATATTC GTGGGGAAAT TGGATAATCT CGATGCAGCC
AAAGCGGCGA TTCCTAGTAC GTTATTGAGT ATATCTTTTC CTTACCCCAC GGTTGAATGC
CATGAAAAGT GGAATGATTG GCTAACAGCA TTTGAACCTA TTGAGGATCC ATATCTGCCA
AGTCATGACG ATTTGGCGAC GATTTCTTAC ACGTCGGGCA CCACGTCTTT GCCAAAAGGG
GTGGTATTGA GTCATAAAAA CTTCTCTTCT GCGGCGGACA ACGTCATCGA GCTCTTTGAG
ATTAGAGACG GTGATCGCTC AATCAGTTAT TTGCCTTTGG CGCATATTAC CGAGCGCAGC
TTAGTGGCGG TATTTGTGCG CTGTAAAGTC GAGGTGTATT TTACTGAAAA CCTACAAACA
TTCGTGGCTG ATATTCAGCA CGCGAGCCCT ACAGGGTTCT CGTCGGTGCC ACGCTTATGG
TCGGTATTTC AGGCTCAGGT CATCAGCCAA GTAGGCGCTG AAAAGCTAGA TAAAATGCTT
AAATTGCCAA TTATTGGCAA ATTGGTCGCC AGTAAAATTC GCAAAAAACT CGGGTTACAC
AAGGCCCGCA CCTTTGGCTC AGGTGCTGCG CCTATGTCCG AATCTGTTTT GGCCTGGTAT
CACCGTCTGG GTATTCCAAT CAACGAAGGG TGGGGTATGA CGGAAACTAC AGGTCTTGCC
AGCGGCAATA TGCCTTTTAG CCATGAAGAC TTGGGCACAA TTGGCAAACC TATGCCCAAT
ATTGAAATGA CCCTCTCTCC TGACAGTGAA ATTCTGATCC GCGGTGATTT GGTGTTTAAC
GAATACTATA ACGACCCAGA AGCCACAGCA GAGAACTTCG TTGACGGTTG GTTTAGAACG
GGCGATGTGG CGACCATTAC AGAGACAGGT GCCTACAAAA TCACGGGGCG CATTAAAGAG
CAGTTTAAGA CAGCAAAAGG CAAGTATGTG ATGCCAGTGC CGATTGAAAG CCTGCTTTTT
GCTAACTTAA ATGTGGAGCA AGCGTGTGTG CTTGGAGCAG GACAAAAGCA ACCAGTGGCC
ATGGTGGTGC TTAATCAGTC GTGCAAGCGT AAATCAAGTG AAGTGATTAA ATCTCTGCAA
GACACGCTAG CAAAAGTGAA CAGTCAGTTA GAAAGTCATC AAAAACTCGA TTTCATTATG
GTGTGTAGCC ATGGTTGGAC AGTAGAGAAC GATTTACTGA CAGCCACCAC TAAGGTTAAG
CGCAGTGATG TAGAGCGCCA CTATAGTTGG TTATTTGATG AAGACCGTGG TGAGGGCATA
CTATGGGAAG AAGACTTGCA CTAG
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| Protein sequence | MDNTTVLHSL FAGNEAHPDK PMFHQPIDRQ WHTYTWAEVT EQAKRIAQGL RAQGFEKGDR
IVIMSKNCAE WIIADFAIAM AGMVSVPIYA TAGVNIIEHV INHSGAKAIF VGKLDNLDAA
KAAIPSTLLS ISFPYPTVEC HEKWNDWLTA FEPIEDPYLP SHDDLATISY TSGTTSLPKG
VVLSHKNFSS AADNVIELFE IRDGDRSISY LPLAHITERS LVAVFVRCKV EVYFTENLQT
FVADIQHASP TGFSSVPRLW SVFQAQVISQ VGAEKLDKML KLPIIGKLVA SKIRKKLGLH
KARTFGSGAA PMSESVLAWY HRLGIPINEG WGMTETTGLA SGNMPFSHED LGTIGKPMPN
IEMTLSPDSE ILIRGDLVFN EYYNDPEATA ENFVDGWFRT GDVATITETG AYKITGRIKE
QFKTAKGKYV MPVPIESLLF ANLNVEQACV LGAGQKQPVA MVVLNQSCKR KSSEVIKSLQ
DTLAKVNSQL ESHQKLDFIM VCSHGWTVEN DLLTATTKVK RSDVERHYSW LFDEDRGEGI
LWEEDLH
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