| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3712 |
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| Symbol | |
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| ID | 4175492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4473196 |
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| End bp | 4474914 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056742 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_663268 |
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| Protein GI | 109900013 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAATAC GCCGCCGTTC CCCTGTTTCC GATGAGCATC TACCTGACTC CATCAACCCT
ACCTTAAAAC AAATATACGC CTCTCGCGGC ATTACTTCTG AGCAACAACT TGAGCGAAGC
GCCAAAGCGC TATTGCATTA CAAAGACATG TCAGGCGTTG ATACAGCCGT GAGTATATTG
GCTGATGCAT TAGCCAAGGG TAGGCGGATA ATCATTGTTG GGGATTTCGA CGCCGATGGG
GCAACGAGTA CGGCGCTGAG CATGCTGGCG CTGGGCATGA TGGGCAGTAA AAATCATGAC
TATCTAGTGC CAAATCGCTT TAACTTTGGC TACGGACTGA GTCCGCAAAT TGTTGATGTG
GCACACGAGC AAGGTGCTCA GGTGATCATG ACAGTGGATA ACGGCATTGC GTGCTTTGCT
GGGGTCGAAC GCGCCAAGGA ACTAGGTATT ACCGTGTTGA TAACGGATCA TCACTTAGCT
GCAGAATCAC TACCTGTTGC AGATGCCATT GTTAACCCGA ATCAACCAAA CTGCTCATTT
ATGTCAAAGA ACTTGGCTGG GGTAGGCGTT GCATTTTATT TGATGCTTGC GCTGAGAGCG
CATTTGCGCC AAATTGATTG GTTCGCACAG AACAATCTTG CAGTGCCAAA TCTAGCAGAC
TTATTGGATA TAGTCGCGTT AGGTACTGTA GCCGATGTGG TGCCTTTGGA TGAAAACAAC
CGCATTTTAG TGCATCAGGG GCTATTGCGT ATTCGTAGTG ACAAGTGCCG CCCAGGTATT
CAAGCCTTGG TAGATGTCGC AGGGCGAGAT AAACGTAAAA TGGTAGCCTC TGATTTGGGA
TTTGTTATCG GACCTAGGCT AAACGCCGCT GGACGATTAG ACGACATGTC CATGGGGATT
GAATGTTTAT TGACGGATTC AGATTACAAA GCCAAACAGA TTGCCGTTGA GCTAGACAGT
TTAAACCGTG AACGTCGTGA AATTGAACAA TCTATGCAGC AAGAAGCGGT AACGACCCTC
GAAAATTTAC AATTATCAGA GCAAGACATG CCCCTCGGCT TGGTATTGTA CCAAGCTGAC
TTTCATCAAG GCGTGATTGG TATTTTGGCT GGGCGTATCA AAGAAAAGTA CTTTAGGCCC
ACCATTGCTT TTGCTCATCA AGATGATGAA ATACTTAAGG GTTCAGCGCG CTCTATTCCT
GGGGTGCATA TTCGTGACTT ATTAGAAGAG CTCGGCACTC GCTACCCTGG TGTTATAATC
AAATTTGGTG GCCACGCTAT GGCAGCGGGT TTGAGCATCG AAGCGCGTAA ATTAGACGAA
TTTAAGTTGC GATTTACCCA ACTGGCTGAA GAGCATTTGG CAGGTAAACC GCTGGCTGGC
GAGCTTATTT CAGACGGTGA AATACCCGCC AGCTCGTTGA CTTTAGAATT CAGCCAATTA
CTGAAAGACG CCGGTCCTTG GGGACAAGGT TTCCCTGAGC CACTTTTTGA TGGCGAATTT
GAATTGGTTG AACAGCGCAT TGTCGGCCAA AAGCATTTAA AAATGATGCT GCGTATGCCG
TCGGGAAAAT TAATCGATGC AATCGCATTT AACGTTGATA CCCAAATATG GCCTAACGAG
CAATGCAAAC ACGTGGAGTT GGCCTACAAA TTAGATATTA ACGAATTTCG CGGTCGGACT
TCTTTGCAGT TTTTAGTCGA GGGATTAAAT CCACTTTGA
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| Protein sequence | MQIRRRSPVS DEHLPDSINP TLKQIYASRG ITSEQQLERS AKALLHYKDM SGVDTAVSIL
ADALAKGRRI IIVGDFDADG ATSTALSMLA LGMMGSKNHD YLVPNRFNFG YGLSPQIVDV
AHEQGAQVIM TVDNGIACFA GVERAKELGI TVLITDHHLA AESLPVADAI VNPNQPNCSF
MSKNLAGVGV AFYLMLALRA HLRQIDWFAQ NNLAVPNLAD LLDIVALGTV ADVVPLDENN
RILVHQGLLR IRSDKCRPGI QALVDVAGRD KRKMVASDLG FVIGPRLNAA GRLDDMSMGI
ECLLTDSDYK AKQIAVELDS LNRERREIEQ SMQQEAVTTL ENLQLSEQDM PLGLVLYQAD
FHQGVIGILA GRIKEKYFRP TIAFAHQDDE ILKGSARSIP GVHIRDLLEE LGTRYPGVII
KFGGHAMAAG LSIEARKLDE FKLRFTQLAE EHLAGKPLAG ELISDGEIPA SSLTLEFSQL
LKDAGPWGQG FPEPLFDGEF ELVEQRIVGQ KHLKMMLRMP SGKLIDAIAF NVDTQIWPNE
QCKHVELAYK LDINEFRGRT SLQFLVEGLN PL
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