| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3606 |
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| Symbol | |
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| ID | 4175386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4346165 |
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| End bp | 4347424 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056636 |
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| Product | beta-lactamase |
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| Protein accession | YP_663162 |
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| Protein GI | 109899907 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000041879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCAATCAATT TTTACTCGCC TGCGTTGCCA GTACTTTACT GGCAACCAAT
GCCTTTGCCG ACATCCGTAC TACTAACCCT GAGAAAGTCG GTATGTCAGA AGCGCGTTTA
GAACGTATCG AGCCCGTGAT GCAAGCGTTT GTGGACGAAC AAAAGCTTGC TGGCACACTC
ACTTTGGTCG CGCGAAAAGG CAAAGTGGTC CACCTTGAAG GTGTGGGTTT TAGGGATCGT
GAGGCTAAAA CGCCTATGAC AGAAGACACG ATTTTTCGTA TTTACTCCAT GACAAAACCT
ATTACCGCTG TTGCCGCATT GACCTTGTGG GAGCAAGGTA AATTTCAGAT GAACGATCCG
ATCAGTAAGT ACTTACCAGA GTTGGCAAAC CTGAAGGTGT TCGCTGGAAT GGACGGTGAG
AATATGATAC TTGAAGATAC CAACAAGGTG ATGACCATCA AGCAGCTGTT CACCCATTCT
GCTGGTTTCA GCTATGGCTT TAGTCAAAGC CCAGTGGATA AGTTATACCA ACAGTCGGCA
CTTTTTTCCG GTGAAACAAA GCGTGAAGAC CTGCTGAAAG AGGTCGCAAA GTTACCGCTT
AATCATCAAC CCGGAACGAA GTGGAATTAC AGCATAGGTA CCGACATTAT AGGTGTATTA
GTGGAACGCT TGTCGGGGCA AACCTTGGGA GAATACTTCG AACAGCATAT CTTCAAACCG
CTCAAAATGA GTGACACGGG GTTTTATGTG CCGAAAAGTA AGCAAGATCG TTTAGCACAA
ATTTATGTCA TCAATCAGCA AGGTCAAACC GTTCCTATGG AGAATGAACC TCTGGGTGAC
TACTTGTCTG CCCCTGAAAT CGAATCAGGT GGCGGTGGTT TAGTGTCAAC CATCGCAGAT
TACTATACAT TCGCTCAAAT GCTGTTAAAT GGCGGGGAAT ACAAAGAAAA GCGTATTCTG
GGTCGTAAAA CCGTAGAGTA TATGCGCACT AACCACTTAC CAGCGAGTCT GATCCCGTTT
GAACCCTCTT CGACAGGTGA AGGTTATGGA CTTGCTATGT CTGTTACGGT CGACGAACAG
GGCGCAAATA CGATGGGTTC TAAAGGCGAC TATGGTTGGG CTGGTGCGGC TTCAACTTAC
TTTAGAATTG ATCCAAAAGA GCAAATGATT GTCATCGCTA TGACCCAATT AATGCCCTCG
AGTTTCTTCT CGTACAATAA GGACTTCAAA AATATGGCTT ATCAGGCGCT GGTTGATTAG
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| Protein sequence | MKKTNQFLLA CVASTLLATN AFADIRTTNP EKVGMSEARL ERIEPVMQAF VDEQKLAGTL
TLVARKGKVV HLEGVGFRDR EAKTPMTEDT IFRIYSMTKP ITAVAALTLW EQGKFQMNDP
ISKYLPELAN LKVFAGMDGE NMILEDTNKV MTIKQLFTHS AGFSYGFSQS PVDKLYQQSA
LFSGETKRED LLKEVAKLPL NHQPGTKWNY SIGTDIIGVL VERLSGQTLG EYFEQHIFKP
LKMSDTGFYV PKSKQDRLAQ IYVINQQGQT VPMENEPLGD YLSAPEIESG GGGLVSTIAD
YYTFAQMLLN GGEYKEKRIL GRKTVEYMRT NHLPASLIPF EPSSTGEGYG LAMSVTVDEQ
GANTMGSKGD YGWAGAASTY FRIDPKEQMI VIAMTQLMPS SFFSYNKDFK NMAYQALVD
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