| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3062 |
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| Symbol | |
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| ID | 4174834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3695867 |
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| End bp | 3696925 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056088 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_662622 |
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| Protein GI | 109899367 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAT CTGAGATTTT TTTTCAAGGT CGGCGTATTT TAATAACAGG CCACACTGGC
TTTAAAGGCA GCTGGCTAAC CTTATGGTTA AATCGTTTAG GCGCTGATAT TACAGGTATC
AGTCTTGCTC CAAATACTGA ACCAAATTTG GCATCACTGC TAAATATTGA GTCACTGTGT
GAACATCATA TTTGTGATAT TACAAATCCA GTTGCGCTAA GCGCATTAGT ACAAAAGGCA
AAGCCTGAAA TTGTTTTTCA TCTTGCAGCT CAACCTCTGG TGCGGGTTAG TTATCGTCAA
CCTTTAGAGA CCTTTTCGAC CAATATCATG GGCACTGCCA ATCTATTAGA AGCTTTACGC
AAAGTTGATT CGGTTAAGTC TGTAGTTATG GTAACTACAG ACAAGGTCTA TCACAATAAC
GAATGGCTAT ACCCCTACCG TGAAAATGAT CGCCTAGGTG GTCACGATCC TTATAGCGCC
AGCAAAGCAG CAAGTGAGTT GGTGATAGCC AGCTACAGAG ATGGATATTT AGCAGACCAA
GGCGTAGCCA TAGCAACGGC AAGAGCAGGA AATGTCATTG GGGGAGGGGA TTGGTCACAA
GAACGTTTAA TTCCCGATGC AATCCGCGCT TGGCAAAATC ACCAGGCTAT AGACATTCGC
AGTCCCGATG CGATACGCCC ATGGCAACAT GTATTGGAGC CACTTTGGGG CTACATGCAA
CTAGCAAAAA GGTTATACGC ACAACCTGAA TTAGCTGGCG CATATAATTT TGGTCCTAAC
GCCAACGAAG CCGCAACTGT CCGAGATGTG ATAGATAAGG CACGCAAGAT TTATGGCGCT
GGAAAGGTTC TTTACCCACA CATTGTAGAT GACATGCATG AAGCTGGCTT GCTGATGTTA
GATACCAGTA AGAGTATCAA TGTGTTAAAA AATCTGCCGG TTTGGTCGCT AAATCAAAGC
ATACAAAAAA CCTTTGATTG GTATCGAGAA GTCAATCAGG GCAAAGCTGC ATTAGATGCA
AGCACGGCGG ACATTGACGC TTACGAGGCG TTGTTGTGA
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| Protein sequence | MPLSEIFFQG RRILITGHTG FKGSWLTLWL NRLGADITGI SLAPNTEPNL ASLLNIESLC
EHHICDITNP VALSALVQKA KPEIVFHLAA QPLVRVSYRQ PLETFSTNIM GTANLLEALR
KVDSVKSVVM VTTDKVYHNN EWLYPYREND RLGGHDPYSA SKAASELVIA SYRDGYLADQ
GVAIATARAG NVIGGGDWSQ ERLIPDAIRA WQNHQAIDIR SPDAIRPWQH VLEPLWGYMQ
LAKRLYAQPE LAGAYNFGPN ANEAATVRDV IDKARKIYGA GKVLYPHIVD DMHEAGLLML
DTSKSINVLK NLPVWSLNQS IQKTFDWYRE VNQGKAALDA STADIDAYEA LL
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