| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2688 |
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| Symbol | |
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| ID | 4174448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3274025 |
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| End bp | 3275245 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055706 |
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| Product | nucleoside:H+ symporter |
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| Protein accession | YP_662254 |
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| Protein GI | 109898999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter
[TIGR00889] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGA TAACAACGCG ATTAAGCGTG ATGATGTTTC TGCAGTTTTT TATCTGGGGG
GGCTGGTTTG TTACCTTAGG CACATTCTTG GCTAATACGT TGCAAGCCAC TGGCGGTGAA
ATAGGCATGG CCTTTTCTAC TCAATCGTGG GGGGCGATTA TCGCGCCATT TGTGATTGGC
CTTATTGCAG ATAGGTACTT TAACGCAGAG CGTATTTTAG GTGTATTGCA TCTCATTGGC
GCAGTGTTGA TGTATTGCTT GTATCAGGCG CCTGACTTTG ATGCGTTCTA CCCACTTGTT
TTGGGTTACA TGATCGCCTA CATGCCGACC TTAGCGCTGG TTAACTCTGT GTCATTCGCA
CAAATGGATA ACCCATCGAA GCAATTTGGT AAAATTCGCG TGTGGGGCAC AGTGGGCTGG
ATTGTCGCCG GCTTAGCCAT CAGCTATGCA TTCTCATGGG ATTCGAAACA GGCTATCGAA
GAGGGCATGT TACGCAATAC GTTCTTATTG TGTGCAGGCG CATCTTTGAT ACTCGGTTTG
TTTAGCTTTA CTTTGCCAAA AACACCGCCA AAAAGCGCCG GGGAGCAGGT TGGGCTAAAA
GAGGTGCTGG GCCTTGATGC ACTGGCACTG CTAAAAGACA GAAACTTCTT AGTGTTCTTT
TTATCTTCAG TGTTAATTTG TATTCCTTTA GCGTTTTATT ACCAAAATGC CAACCCGTTC
TTAACTGAAA TCGGCGTGGA CAACGCAACG GGCAAGATGA CCTTAGGCCA AGTGTCTGAA
GTGTTATTCA TGCTAGCCCT GCCAGTATTC TTAAACCGCT TCGGCATCAA AATCACTTTG
CTCATCGGCA TGCTCGCTTG GGTAGTGCGT TATGCATTAT TTGCTTACGG CGATGCAGCT
GGCGGAGTTG CATTACTGCT CGTGGGTATC GCATTGCACG GTATCTGTTA CGACTTCTTT
TTTGTTTCAG GACAAATCTA CACTGATTCA AAAGCAGGAG AAAAAGTGAA AAGCGCCGCT
CAGGGCCTGA TTACCTTAGC CACATACGGT GTGGGTATGC TGATTGGCTT TTGGGTCGCC
GGGCAAATAA CCGATAAATA CACCACCGCA GCCGGCCACT CTTGGCTTGA TATCTGGTTG
TTCCCTGCGG CGTTCGCCTT AGGTGTGTTT GTTATTTTCA TGTTCACGTT TAAGGACGAA
AAGGTGTCAG GTAATGAGTA A
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| Protein sequence | MNTITTRLSV MMFLQFFIWG GWFVTLGTFL ANTLQATGGE IGMAFSTQSW GAIIAPFVIG
LIADRYFNAE RILGVLHLIG AVLMYCLYQA PDFDAFYPLV LGYMIAYMPT LALVNSVSFA
QMDNPSKQFG KIRVWGTVGW IVAGLAISYA FSWDSKQAIE EGMLRNTFLL CAGASLILGL
FSFTLPKTPP KSAGEQVGLK EVLGLDALAL LKDRNFLVFF LSSVLICIPL AFYYQNANPF
LTEIGVDNAT GKMTLGQVSE VLFMLALPVF LNRFGIKITL LIGMLAWVVR YALFAYGDAA
GGVALLLVGI ALHGICYDFF FVSGQIYTDS KAGEKVKSAA QGLITLATYG VGMLIGFWVA
GQITDKYTTA AGHSWLDIWL FPAAFALGVF VIFMFTFKDE KVSGNE
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