Gene Patl_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2259 
Symbol 
ID4172413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2749403 
End bp2750167 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content45% 
IMG OID638055269 
ProductFAD-binding 9, siderophore-interacting 
Protein accessionYP_661831 
Protein GI109898576 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCA AAGCACGTTT AGTTAGCGTT ACACGCGTAG AATCATTGTC GCCACATTTA 
CGTCGGATCG TATTTAGTTC AGAAGAACTG GCTGGATTCC CCCAAGGAAA AGAAGGTGCT
CATGTAAAGG TACTGGTACC TCATCCGGGG GAACAATTTC CTGAACTCGC TTTTGATGCA
CCCAAACCAG CATTTAAGCG CTCTTATACC ATTCGCAGCT TTGATGCAGG ATCGTCAGAG
TTAACCATTG ATTTTGTAGT CAATCGACAC GCAGGTCCAG CGACCAATTG GGCTAGTGCG
GCCAAAGTAG GGGACTTCGC GGCAATTGCC GGCCCTGGAG CCCCTAAGTT AAGCAACTAC
AATGAAGACA ACTACTTACT TATTGGTGAT TTAACCTCAA TAAACGCAGT TAATGGTTTT
GCTAGATACA TACCGAAACA GGCAAACTTA AAATCGATTA TTACTGTACC CACACGCGCT
GATGTGATTG CCATGGATGC GGGGGAGCAC CTCAATATAG AGTGGCATAT CGAAGATGAA
TCAAGCCATA CACTCGAACA ACACGTTGAA AGGGTCGCTA AAATAATGCC CTGTGACAAC
ACTCAGGTAT TTTTCGGCTT GGAAGCGCGT AGCGTGCGAA CAATAAAAGG CATATTGTTG
GATGACTTAG GTTATGAGCG CATGAATCTA TTCGCTACTG GGTATTGGAA GAAAGGTGTG
GATGCAGATA AATTTAATCG CCAGAAGCAG CAGAGCCCGC TTTAA
 
Protein sequence
MKPKARLVSV TRVESLSPHL RRIVFSSEEL AGFPQGKEGA HVKVLVPHPG EQFPELAFDA 
PKPAFKRSYT IRSFDAGSSE LTIDFVVNRH AGPATNWASA AKVGDFAAIA GPGAPKLSNY
NEDNYLLIGD LTSINAVNGF ARYIPKQANL KSIITVPTRA DVIAMDAGEH LNIEWHIEDE
SSHTLEQHVE RVAKIMPCDN TQVFFGLEAR SVRTIKGILL DDLGYERMNL FATGYWKKGV
DADKFNRQKQ QSPL