Gene Patl_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2148 
Symbol 
ID4173403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2600475 
End bp2600876 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content37% 
IMG OID638055156 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_661720 
Protein GI109898465 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT TTATTAGCAT TTTGACTCAT GGACGTCGAT TACAAGGAGC GGTAAAGGAA 
TTATCGGTAG AAGAATTAGA AACAGTCGCA GATAAACTCA ATTCGATTAT TGATAACCGT
AAAGCGAAAG AATTAGAGCA GCAAGAAGCG GCCAAAGAGA AAAACGAAAA GCTAAATGAG
ATCCTAGCGC AATTAGAAGC AGCAGGACTT GATGTCAACG ATTTACAAAA AGCTGAACCC
GCGAAAAAAT CAACTAAAGT GGGCAAAAAA CGTCCAGTAA AATATATTTT AAAAGACAGC
GCAGGTAATG AGCATAAATG GACTGGTATT GGTCGTATGC CTAAAGTTTT CAAAGCTGAA
CTTGATAACG GTAAATCACT AGATTCTTAT CTACTAGACT AA
 
Protein sequence
MSDFISILTH GRRLQGAVKE LSVEELETVA DKLNSIIDNR KAKELEQQEA AKEKNEKLNE 
ILAQLEAAGL DVNDLQKAEP AKKSTKVGKK RPVKYILKDS AGNEHKWTGI GRMPKVFKAE
LDNGKSLDSY LLD