| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1794 |
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| Symbol | |
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| ID | 4172042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2153263 |
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| End bp | 2154543 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054804 |
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| Product | citrate synthase I |
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| Protein accession | YP_661369 |
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| Protein GI | 109898114 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000880013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA ATAAAGCCAC TTTGAAAGCA GGTGATGTAG AGGTCGAACT TCCGATTCTA
TCTGGTACTG CAGGGCATGA TGTAATCGAT GTACGTACGT TGGGAGCCAG CGGTTATTTC
ACTTTCGATC CGGGCTTTAT GGCGACAGGC TCATGTGAGT CGTCAATCAC ATACATAGAC
GGCGCAAAAG GTATTTTGCT CCATCGCGGC TACTCAATTG AAGATTTAGC ACGCGACGCT
GACTACATTG AAGTATGTTA CATGTTGTTA CATGACAAGA CGCCAACGAC TGAAGAGTAT
CGTGAATTTA AAGACACCAT CACGCGCCAT ACCTTGGTTC ACGATCAGGT TAATAACTTC
TTCCGTGGAT TCCGCCGTGA TGCCCACCCT ATGGCGATGT TGTGCGGTAC AGTTGGCGCA
ATGGCTTCGT TCTATCACGA TGATTTAGAC ATTTCAGACG CAGATCAACG ACTACGCAGT
GCGTATCGTT TAGTCGCTAA AATGCCGACT TTGGTCGCCA TGTGTTACAA GTACAATATT
GGTCAACCAT TTGTCTATCC ACGTAACGAT TTGTCATACG CTGAAAACTT CTTAAATATG
ATGTTCTCTG TACCGGCTGA AAATTACAAA ATCAGCCCTG TGGTAGCTCG CGCAGTAGAC
AGAATCTTTA CATTGCACGC AGACCATGAG CAGAACGCGT CTACGTCTAC CGTACGTTTA
GCGGGTTCAT CTGGCGCTAA TCCTTATGCA TGTATTGCCG CTGGTGTTGC ATCATTATGG
GGCCCTGCTC ACGGTGGTGC TAATGAAGCT TGTTTAAACA TGCTGCAAGA AATTGGTTCA
GTGGATCGCA TTCCTGAATT TATCGACCGC GCGAAAGATA AGAACGATCC TTTCCGCTTA
ATGGGCTTTG GTCACCGTGT TTACAAAAAC TTTGACCCTC GTGCAACCGT TATGCGTGAA
AGCTGTCACG AAGTATTGGC TGAATTAAAC ATTGACGATC CGTTGTTGAA TGTTGCCATG
GAGCTAGAGC GTATTGCCCT TAGCGACCCA TACTTCGCTG AGAAGAAATT GTTCCCAAAT
GTAGATTTTT ACTCTGGCAT TATTCTTAAG GCAATTGGTA TTCCAACGAA TATGTTTACC
TGTATTTTTG CTTTAGCAAG AACGGTAGGT TGGGTATCTC ACTGGCATGA AATGTTGAGC
CAGCCAGGTC AGAAAATCGG CCGTCCTCGT CAACTATACA CTGGCGAAGC ACAACGAAAA
TACAACAAAA TCGACAAATA A
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| Protein sequence | MADNKATLKA GDVEVELPIL SGTAGHDVID VRTLGASGYF TFDPGFMATG SCESSITYID
GAKGILLHRG YSIEDLARDA DYIEVCYMLL HDKTPTTEEY REFKDTITRH TLVHDQVNNF
FRGFRRDAHP MAMLCGTVGA MASFYHDDLD ISDADQRLRS AYRLVAKMPT LVAMCYKYNI
GQPFVYPRND LSYAENFLNM MFSVPAENYK ISPVVARAVD RIFTLHADHE QNASTSTVRL
AGSSGANPYA CIAAGVASLW GPAHGGANEA CLNMLQEIGS VDRIPEFIDR AKDKNDPFRL
MGFGHRVYKN FDPRATVMRE SCHEVLAELN IDDPLLNVAM ELERIALSDP YFAEKKLFPN
VDFYSGIILK AIGIPTNMFT CIFALARTVG WVSHWHEMLS QPGQKIGRPR QLYTGEAQRK
YNKIDK
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