Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1440 |
Symbol | |
ID | 4173597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1730483 |
End bp | 1731457 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638054450 |
Product | LysR family transcriptional regulator |
Protein accession | YP_661017 |
Protein GI | 109897762 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG CTGATTTACA GGTGCTGCTA AAAGTGGCTG AGCTTCATTC CATTTCCGCG GCGGCAAACC AACTCGATAT GAGCTCTTCG GCGGCCAGTG TGGCTTTGAA GCGCATCGAG ACGCAGCTCG GCGCGCAACT GTTCGTGCGT ACCACGAGGC AAATACGCCT TACGTCTGAA GGCGAACGCT ACTTACCCCT TTGCCAGCAG GCCTTGGATT TACTGCAACA GGGGCAAGTA TTAATTAACG AAGAGCAACA ATCGATCAGT GGTGAGGTGC GCATGGCCGT ATCGTCAGAA ATGGGTCGAA ATCTTATGCG TGTGCTGCTG AATAATCTTA TGCGCAAGCA CTGCGCTGTG ACATTGCGCT TACATGTGAG TGATAGTAGA GCCGATTTTT ACCGCGATGG TGTTGATGTT GCTTTGCGTG CGATCACCAA AGATGCGGCG AAAGAGCTTA ATTTATATGG CTTTAAAATA TGTAATATTC CCCATGTGCT TTGCGCTGCC CCAAGCTATA TTGCCGAGCA CGGCGAGCCG CAAACCCCTG ACGAGCTGCC CCAACACAAC GCCCTGCTTT ATAAGCTCTA TGAAGTGGTG CATGACGGTT GGGAGCTTTA TCAAAACGAC CAACAGTACA AAATCAAAAT GAATAGCGAT CGCGCCGTGA ACGATGGCGA TATTGTTAGG CGCTGGTGTG TCGACGGCGA AGGTATTGCC AAAAAATCAG CCATTGATGT GGCCCAAGAT TTACTAGCAG GTCAGCTTAA GCGGCTTATG CCCGAATATA AAATTCCGTT AACCCAAATG TGGTTAGTGC TACCCAGTCG CCAGTTAATT TCCCCCGCTA TTCGCCTCAT TCGAGATGAA CTGAAACGGA ACATCAACGA ATTGAGAACA CAATTAATCA CCAACCAACT CTTATCCGAA CAAGAGTGGC CAAAAGCCGA GGAAGAATGG CCACAGGCGG AGTGA
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Protein sequence | MKIADLQVLL KVAELHSISA AANQLDMSSS AASVALKRIE TQLGAQLFVR TTRQIRLTSE GERYLPLCQQ ALDLLQQGQV LINEEQQSIS GEVRMAVSSE MGRNLMRVLL NNLMRKHCAV TLRLHVSDSR ADFYRDGVDV ALRAITKDAA KELNLYGFKI CNIPHVLCAA PSYIAEHGEP QTPDELPQHN ALLYKLYEVV HDGWELYQND QQYKIKMNSD RAVNDGDIVR RWCVDGEGIA KKSAIDVAQD LLAGQLKRLM PEYKIPLTQM WLVLPSRQLI SPAIRLIRDE LKRNINELRT QLITNQLLSE QEWPKAEEEW PQAE
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