Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1278 |
Symbol | |
ID | 4173289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1533918 |
End bp | 1534991 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054285 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_660858 |
Protein GI | 109897603 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.285507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGAAT TTAGCCCGCA CTCTAAACAA TTGGCGTCTA GCCTCTTCCT TGAACGTTTG ATTGCAGATC AAACGTTCGA TCAGTTCCAT TTCATCAATG ATCGCATTGT TAGCACAATT GCTCACGAGC ATTTCACCCC CAGCAAGCTC AGCTTAAAGG GCTTCGATTT AACCAAAGAG CACAGTAGCT TGGTTATCTT TGCTGAGGGG TTAAGCCTCG CGAAAGTCTT CGCTGTGTCC ATGGCCTTTG CGGATAAGTT AAATGTGCTG TGTTACCAAG TTTTGCGAGA TGTGCCTCTT TCTGGCGTCG GTATCGTGCT GCGCGTAGAG CGGCTGAGCA TAGAAGACCT AAGGCCATTA TTAGAGCGTA TTGCGAATGA GCATGCAGTA GAAATATGTT TATTTTCAAG TGCGCCGCGT TTGGACGAAC CAGGTTTATT GCTAATGGAC ATGGACAGCA CAGTCATCAG TATTGAATGC ATCGATGAAA TTGCCAAGCT TGCCGGGGTA GGAGAGGAAG TCTCCAGTGT CACTGAGCAG GCCATGCAAG GAAAACTCGA TTTTGAGGAA AGCTTACGTA GCCGAGTCGG GTGCCTCAAG GACGCAAATG AAGACATATT GCAGCAAGTG CGCCGTGCCC TGCCGCTAAT GCCGGGTATT TTCAACTTAG TTAAATTCTT AAAGCAGCAC CAGTGGAAAT TAGCGATTGC CTCCGGTGGC TTTAGTTATT TTGCGGACTA TTTGGCTGAC AGATTGGAGC TTGATGCTGC TGTAGCGAAT GAGCTTGAAA TAGTTGATGG TAGACTGACG GGACGGGTCT CGGGGTCAGT GGTCGATGCT CAGGTCAAGG CTGCTACATT GCTAGAGCTG GCGAATGAAT TCGATATCAC AGATTGTCAA ACCATGGCCA TGGGCGACGG GGCAAATGAT TTGGTCATGA TGAATGCTGC AGCGCTTGGC GTTGCATTTC ACGCAAAGCC GGTTGTACGT GCCCAAGCGG ATATTTCTAT TCGAAACGGC GGTTTAGATT CTATATTGTG GGTATTGGCG GCGGCCACAC CGTGTAAAAA ATAA
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Protein sequence | MFEFSPHSKQ LASSLFLERL IADQTFDQFH FINDRIVSTI AHEHFTPSKL SLKGFDLTKE HSSLVIFAEG LSLAKVFAVS MAFADKLNVL CYQVLRDVPL SGVGIVLRVE RLSIEDLRPL LERIANEHAV EICLFSSAPR LDEPGLLLMD MDSTVISIEC IDEIAKLAGV GEEVSSVTEQ AMQGKLDFEE SLRSRVGCLK DANEDILQQV RRALPLMPGI FNLVKFLKQH QWKLAIASGG FSYFADYLAD RLELDAAVAN ELEIVDGRLT GRVSGSVVDA QVKAATLLEL ANEFDITDCQ TMAMGDGAND LVMMNAAALG VAFHAKPVVR AQADISIRNG GLDSILWVLA AATPCKK
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