| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0767 |
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| Symbol | |
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| ID | 4173945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 875474 |
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| End bp | 878125 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053769 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_660349 |
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| Protein GI | 109897094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000108797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGA AAATATCCAA GTTAAGCTGC GCGGTCGTTG CCGCACTTGC TACTACGCCC
GTCTATGCTC AGCAAGAAGC CGCAAAAACA GGCAAAGCGA GTATTGAGAC TATTGAAGTA
ACTGCAACAA AACGCTCAGA GTCGATTCAA GACATTCCCG TGTCAGTGAC CGCACTAAAC
GGTGAAGCAT TAGAGAACCT TGGGGTTGAT AATTTTCAAG AATACGTCGA GTTCTTGCCT
AATGTGACCT TTCAGGGTAC AGGCCCTGGA CAAAACGAAA TTTACATTCG TGGCGCAGCA
ACGACCCAAA GTAATATCTC TGTTTCATCT GTGCAGGCAC TTCAGCCTTC TGTCGCGTTT
TACCTGGACG AACAACCGGT TTCAATGCAG GGCCGTAATC TAGATATTTA CGCTACCGAT
ATGCAGCGCA TTGAGGTACT ACCTGGGCCA CAAGGGACCT TGTTTGGTGC CAGCTCACAA
TCAGGCACCG TAAGATTGAT CACCAAAAAA CCTGATCACA CTGGATTTGC TGCAGGGGTT
GATACCAGCA CCAGTTTCAC TAAAGGTGGT GAAATGAGTA ATTCTGTAGA AGGGTTTATA
AACTTCGCAG TATCAGACGA CCTTGCCTTT CGCGTAGCGG CCTACACTGA TAACCAAGGC
GGTTGGATTG ATAACATCCG CAACGATCCA GCGAATGGCG GATACATCGG TAGCGCAGTG
GTTATCGACA GAATCTCTGG CGGTGTGCTT AGCGACCCTG AAAATACTCC GGTGATTTCA
CCTGAAAACG ATGCGTTAGT GGAAGATGAC TTTAACGATG CGGTTTATTC AGGTGCGCGT
TTTGGTCTGT CTTACATTAT TAATGAAGAT TGGGACTTAT TGGTTCAACA CACTCAGCAA
ACATTGAGCA CTGAAGGCGT GTTTGCATAC GATCCTAATT TAGAAAGGGA AACCTCAACT
AACCGCTTTG TACCTGAAGA CAATGATGAC GAGTTTGGTT TGACTACTTG GACCTTAGAA
GGGCGTTTAG ACAAACTAGA CATCGTTTAC ACTGGGGGAT ACTTAGACCG CTCAATCGAC
TCAACCATTG ATTACACGGG TTATACCAAC GGCGGTTTAT TCTCTGCTTA TTATGTGTGT
AATTATGGTG GAGATGTTGC GCCAGAAGAT GAGATTTGCT TAGACCCAAC TAAGTATTAC
AAGGAAAAAA CCGACAGCAC GCGTATGACC CACGAGTTGC GCTTTAATAC GCCAACAGAC
AATGTATGGC GTCTAACTGC TGGTGTATTT TACGATGAGC AAGACCTCAA TTCAGTGGGT
AAGTTTAATA TCGCTAATAC GGACAAGTTC GACGATTTAG CCCGAACTTT GGTAGGCTCT
GAGGGGGTTA ACTCAACGAG TCAACCCTTT GAGCCGAGCA TCAGTTTCGT AAACGATATT
CAGCATGCAA TTGACCAAAT CGCAGTGTTT GGCCAAATAG AATACGACCT GACCGACGAC
ATTACCGCAA CGTTTGGTGC TCGCTGGTAT GAAATTCAAG ATACGTATAA AGGCTCCACC
ACCACTGTTG ATGTGAGTCG CCGTTTGCGT GCGTTCGGTA CGCAAGATCC AGCTGAATTG
GCGGCATCTG GTTTAGATGA TGGTGTGATA GCCGCGATAG AAAGCGGGCA ACTTGAAGTT
GATTTACTCG ATGGTGATGG CACATTGACC GTAGACGATG TGATTTTGAA AGCGTCAGTT
GACTGGAAGG TAAACGAAGA TATTCTGGTA TTCGCCACCT ATTCTGAAGG CTTCCGTCCG
CCTGTAACCA ACCGCGTAGG TGGTGGTTTA GCGACCAATC AAACAGGGGC GTTTGAAGAT
TTCCGTATTC CAGTATATTC AACAACGGAT GAGTTAGATA ACTATGAGTT CGGTATCAAA
GGTGACTTCC TAGACGGTAT TTTACGTGTT AATGCTACGG CGTACTATTC TGAAATCAGT
GACCTACAAA CCTCACGTTA TGACCCAACC AACATCAGCT TCTTGGTATT CACTGACAAT
GTTGGTGACG CTGAAATTCG CGGTCTTGAT GCTGACTTAA CCTGGTTGGC CACTGACAAC
CTTGTTATCA ACGCGGCGTT TAGTGTGTTA GACACTGAGT TGACGAGCAT TAACGCTGCA
CTAGATGGAA TAGCGCCACC TGTGGGCAGT AAACTACCGT ATTCTGCTGA TTTCTCGGGC
AATATCCGTG CACAATACTT TTATGAGTTA GACAATGGCT TTACTGGATA TATCAACGGC
TCAATTAGCT ACACAGGTGA TCGCTTAGCG AGCATGTCGA TGGACGCCTA TGCTCTTGAA
GATGCTGCAC AGCTCGTTTA TGGCGCAGGG ACAGGCCTAA GCATTGAGCG TGAAGCCGCT
GTGTACGAAG GCGTAACGTT TGCTGATTCA AACGGTGAGA CCATTCAAGG TGGGCGTTAC
ATCCAAGACA GCTACATACT TGCTAACCTT GCATTTGGTA TTACTAACGA TGAATGGAAA
GCTGAGATCT TTATTGATAA CCTAACGGAT GAGAGTGCTA TCTTGTATAT TGATGCCCAG
CAATACACGC CTAAAATAGT GTCTAACAGA CCACGTACCG TAGGGTTAAG ATTGTCTTAC
GACTTCTTCT GA
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| Protein sequence | MRMKISKLSC AVVAALATTP VYAQQEAAKT GKASIETIEV TATKRSESIQ DIPVSVTALN
GEALENLGVD NFQEYVEFLP NVTFQGTGPG QNEIYIRGAA TTQSNISVSS VQALQPSVAF
YLDEQPVSMQ GRNLDIYATD MQRIEVLPGP QGTLFGASSQ SGTVRLITKK PDHTGFAAGV
DTSTSFTKGG EMSNSVEGFI NFAVSDDLAF RVAAYTDNQG GWIDNIRNDP ANGGYIGSAV
VIDRISGGVL SDPENTPVIS PENDALVEDD FNDAVYSGAR FGLSYIINED WDLLVQHTQQ
TLSTEGVFAY DPNLERETST NRFVPEDNDD EFGLTTWTLE GRLDKLDIVY TGGYLDRSID
STIDYTGYTN GGLFSAYYVC NYGGDVAPED EICLDPTKYY KEKTDSTRMT HELRFNTPTD
NVWRLTAGVF YDEQDLNSVG KFNIANTDKF DDLARTLVGS EGVNSTSQPF EPSISFVNDI
QHAIDQIAVF GQIEYDLTDD ITATFGARWY EIQDTYKGST TTVDVSRRLR AFGTQDPAEL
AASGLDDGVI AAIESGQLEV DLLDGDGTLT VDDVILKASV DWKVNEDILV FATYSEGFRP
PVTNRVGGGL ATNQTGAFED FRIPVYSTTD ELDNYEFGIK GDFLDGILRV NATAYYSEIS
DLQTSRYDPT NISFLVFTDN VGDAEIRGLD ADLTWLATDN LVINAAFSVL DTELTSINAA
LDGIAPPVGS KLPYSADFSG NIRAQYFYEL DNGFTGYING SISYTGDRLA SMSMDAYALE
DAAQLVYGAG TGLSIEREAA VYEGVTFADS NGETIQGGRY IQDSYILANL AFGITNDEWK
AEIFIDNLTD ESAILYIDAQ QYTPKIVSNR PRTVGLRLSY DFF
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