| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0536 |
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| Symbol | |
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| ID | 4173520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 625702 |
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| End bp | 628728 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053538 |
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| Product | OmpA family Oar-like outer membrane protein protein |
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| Protein accession | YP_660119 |
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| Protein GI | 109896864 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGAA AAACTAAACT CACCAGCATC GCGCTTGCGG TAGCCATGTC ATTAGGCATG
TCGTCTGCTG CTCTTGCGCA AACCACCTCT TCAGGAATGA CAGGGCAAAT TGTAGGCCCA
AATGGTAACC CTGCGGCAGG TACTGTAGTT AAAGTCACTC ACGTACCAAC TGGTGCAGTA
AAAACGGCAA CTGTTAACTC TGCAGGTACG TTTAATCTTA ATGGTTTACG CGTTGGTGGT
CCTTACACTA TTGAGCTTGA CTCAAATACT TTTGCTGACC AAACGATAGA AGATGTTTAT
TTAAGCTTAG GTGAAACGGC GCCCATTAAT CGCGTTTTGG CCAGTGAAGA AAATATTGAA
CGCATCGCTG TGTCAGCTTC ACAAATCAGC AGCTTATCTT TTGGTAAAAT TGGCCCGGGT
GCTAACTTTG ACCTATCCAC GTTAGAAAAT GCCCCTGCGA TTAATCGTGA CTTGACTGAT
ATCGTTAGAA TCGATCCTCG TATCTACGTT GATGAAGGTG GAAGCGGCGG TATTCAGTGT
GTGGGTAAAA GCCCTCGTTT CAACAGCTTG ACAGTTGATG GCGTGCGCAT GAATGACTTG
TTTGGCCTTA ACTCTAACGG TTACCCAACT GAAAGAATGC CTTTCTCTTA TGATGCTATC
GAAGGTGTTG CAGTAGAAAT CGCACCGTTC GACGTTATAT ATGGTGGTTT CTCAGCATGT
AATATCAGTG CGGTAAGTAA AACAGGTACC AACGAAGTGC ATGGCTCTGC TTTTTATGAT
TACGGTAGCA ATGACTTGCG CGGTGATTCT TTAGAAGGCG ACGACATTAA TCTCGGTGAC
TACACTGAGA AGCGTTACGG TTTTAGCGTA GGTGCCCCGC TAATCAAAGA TACATTATTT
ATTTTCGCTG CATACGAGAA GCTAGAAGGC GCCAATATTT TTGACCGAGG CGTAGCTGGC
TCAGGTGCAA TCAATGAGGT TGCTCTCTCG CAAACGCAAT TAGATGACAT TATCCGTATC
TCGAATGATT TATATCAGTT TGACCCGGGG ACGGTCCCTT CAAGCCTTGC AAACGAAGAT
GAAAAGCTTT TAGTCAAATT AGATTGGAAC ATAAACGAGC AACACCGAGC GTCTTTTACC
TATAACTGGA ATGACGGCAA TAATTTTGCT GAATCAGATG GGGATTCAGA TGAATTTGAA
CTTTCTAGTC ACTTTTACGA ACGTGGCGCA GAGCTAACCT CGTATTCAGG CGTATTGTAC
TCTGACTGGA ATGACAAATT CTCAACTGAA GTACGCCTTT CTTATACCGA ATTGGACAAT
CGTCAAAACT CTTTAACGGG TGATGGCACA GTAGGTGGGA ATGACTTCGG TGAAGTTAAG
ATCTTTTTAG AAGACATGAC TGTCTTTTTA GGTTCGGATG ATAGCCGTCA AGTGAATGAC
TTGAACTGGG ACGCACTTAG CATGATGTTC CGTGGTAACT ACTACATGGA TAACGGTCAT
ACACTTACGT TTGGTTATGA GAGCGACGAC TTAGAAATAT ATAACATTTT CGTACAGCAT
GCTGAAACGT CACTTTCTTT TGATAGCATT GCAGATTTTG AAAATGGCAT CGCTAGTGAC
GTTGAGTATG GCCATGCTTA TTCTGGAGAC ATTAATGACC GAGCTGCTGA GTGGGGTTAC
ACGTCGCACA GCACTTACCT TCAAGATGAG TTTTATTTAA CTGATGATTT GAAAGTAATC
GCAGGTTTAC GTTACGACTG GATAACTACA TCAGACAAAC CTGTAGAGAA TGCAGATTTT
CTTGCAGGCA ATGGTTATAG CAACACTGCT AACTTGGACG GTATTAGCTT GTTACAACCA
CGGATTGGTT TGAACTATAC GCTAAGTGAC AGTACCGAAA TCCGTGGTGG TGTTGGTCTA
TTCTCTGGTG GTAACCCGAA CGTATGGATG ACCAATAACT ATCAAAATAC CAATGTAACT
GGCGGTGAAG TAGACGGCGG CGATTTTGGT TATGATGATG GCTCTCGCAG CTTATTCGAT
GACGATGTTG TTTGGGTTAA TGTTGAAGAT GGCGCACCGG TTGGACCAGG TTATGGTGTT
CCATCTGAAC TTGATGACTT GTTAGACAAC GGTAACGCAG GTAACTTCGA GTCAAATAAT
TTAGATCCAG ATTTTAAAAT GCCAAGTGAG TGGAAAGTAT CAGCGGGTAT CACTCATGTT
ACTGACTCAG ATTATGTTTT AAATGCAGAT TTATTAGTGT CGTTTACACA AGACCAAGCG
ATGATAAAAT ACGTTGGTAT TGAAGAAGTT GGCATAACCG ATGCTGGTTA TGTGGATTAT
GACAGAAACG GTTATGGCTC ACTTGAATTG ACAAATTCTG ATGAGGTGTC AACGTCATAT
TCACTGACTG GTACTCTAGA GAAAACTTGG GATAACGGCT TGCGCTTAGT AACTGGTTAC
TCGTATAACC ATGCTGAAGA TGTGCAGCCT ATGACCAGCT CGGTTGCATT TTCTAACTAT
CAATATCGTG CGTTTACTAA CCCTAATGAA GATGTATCTT CATTGTCAGA TTGGAATATT
GAGCATCGTT TCACTGCAGA CTTTAGTTAC GCAGTAGAGC TATTTGCAGG TTTAGAAACA
CGCTTCAACA TGTATGCGTT GGCGCAATCA GGTCGACCAT ATAGCTTCAC GCTATCTCAA
GATGACGGCA ATAGTGCTTT TGGATTTACA CCGTATCTAG ATAGCAATAG TGTGCTACCT
ATCGGAGCGG AGCGTAACGA TCAAGAGAGT GATTGGTGGA CCAAGGTTGA TATTGCGGTA
AGACAAGAGA TACCAGCATT TGCTGATGGT CACTCGGCAA CGGTGAGCTT AACCATGGAT
AACTTCACTA ACTTCCTTAA CGATGATTGG GGTATCTTGG AAGAAGTTTC TTTCAATACT
GCGACAATAG GTAATTCATC TCCTCAAAGT CGCCAAGGTG ATGCATCTTT GTGGGAAATG
CGTATCGGTG TTAACTACAG ATTCTAA
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| Protein sequence | MLRKTKLTSI ALAVAMSLGM SSAALAQTTS SGMTGQIVGP NGNPAAGTVV KVTHVPTGAV
KTATVNSAGT FNLNGLRVGG PYTIELDSNT FADQTIEDVY LSLGETAPIN RVLASEENIE
RIAVSASQIS SLSFGKIGPG ANFDLSTLEN APAINRDLTD IVRIDPRIYV DEGGSGGIQC
VGKSPRFNSL TVDGVRMNDL FGLNSNGYPT ERMPFSYDAI EGVAVEIAPF DVIYGGFSAC
NISAVSKTGT NEVHGSAFYD YGSNDLRGDS LEGDDINLGD YTEKRYGFSV GAPLIKDTLF
IFAAYEKLEG ANIFDRGVAG SGAINEVALS QTQLDDIIRI SNDLYQFDPG TVPSSLANED
EKLLVKLDWN INEQHRASFT YNWNDGNNFA ESDGDSDEFE LSSHFYERGA ELTSYSGVLY
SDWNDKFSTE VRLSYTELDN RQNSLTGDGT VGGNDFGEVK IFLEDMTVFL GSDDSRQVND
LNWDALSMMF RGNYYMDNGH TLTFGYESDD LEIYNIFVQH AETSLSFDSI ADFENGIASD
VEYGHAYSGD INDRAAEWGY TSHSTYLQDE FYLTDDLKVI AGLRYDWITT SDKPVENADF
LAGNGYSNTA NLDGISLLQP RIGLNYTLSD STEIRGGVGL FSGGNPNVWM TNNYQNTNVT
GGEVDGGDFG YDDGSRSLFD DDVVWVNVED GAPVGPGYGV PSELDDLLDN GNAGNFESNN
LDPDFKMPSE WKVSAGITHV TDSDYVLNAD LLVSFTQDQA MIKYVGIEEV GITDAGYVDY
DRNGYGSLEL TNSDEVSTSY SLTGTLEKTW DNGLRLVTGY SYNHAEDVQP MTSSVAFSNY
QYRAFTNPNE DVSSLSDWNI EHRFTADFSY AVELFAGLET RFNMYALAQS GRPYSFTLSQ
DDGNSAFGFT PYLDSNSVLP IGAERNDQES DWWTKVDIAV RQEIPAFADG HSATVSLTMD
NFTNFLNDDW GILEEVSFNT ATIGNSSPQS RQGDASLWEM RIGVNYRF
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