| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0397 |
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| Symbol | |
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| ID | 4173071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 455020 |
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| End bp | 456267 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053395 |
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| Product | major facilitator transporter |
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| Protein accession | YP_659981 |
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| Protein GI | 109896726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTAG TGGATAAAGA CAGCCGCTAC TATCTAGCGG GTTTTTTAAA TGCCTGCATT
ATGGCGAGTC TGATGCCTGT TCTGTCTTTA TATGCATATC GTTATTTAGA TACTACTGCT
ACTCAACTAA GCACGCTACT GGGGGGGTAT GCGTTGAGCA GCATTATGTA CGCGTTTCTC
ATTGCGCGTA TTGTGGAGCA AGTTGGTAAG CATAAACATT GGCTATTAGG GATTAGTTTT
TTAGCTGCAG GTGCATTGGT TGTGCTGGCT AACACGCAAA ATTATCTGGT TGTATGTGTG
GTGATGCTTG GCGTATTTGC CCCTTTTCAT GCATCAACAG CCTTGTTAAT GGGCCTAGCA
TTTCGTTATT TTCGTAAAAC ACAGATTAAG CGGGTCAACG CGAGGGTAAT GGCGACAGTC
AGTGCCGCTT GGGTTGTTTG TCCGAGTATG GCGTTTTACA CGGTCGAGGA ATTTGGTTTC
TCTGTGTTTT TATATGCTCT GGCCTTAGTC ATGCCCTTGC TTACTTTGAT GTTTTGTACT
TTACCCGCCT CAAATGAAAA AACAATTCAA TCAGACGCAG AAATACATCA GCCTAGGGGA
CAACTCGGTG TAATAAAAAA CAAAGGCTTG TTAGCCCCAA AAACGAAAGT AAAAAATCGT
TTAGGGCTGT ACCTGCGCCT CTTACCTCCC GTACTGTTTT TCGCATTGCT CAGTTTTGCG
ATAAATTTAT ACCAACATAT CTTGCCAGTT TATTTTGTGG AACAAGCACT GCCTGTCAGT
TTGGTAGGTA CGCTCTTTAT GTGTGCCGCT ATTGCTGAAA TTGTGTTAAT TGTTCGTTGT
GTAAATCTAT TGTCTCGCTT TACGTATTTT CAGTTATTCA TCATTGCGAG CGTTAGCGGT
ATCGCGTTCT TTTTATTGCT TCCACTTAAC CAAAGCATGA CTTATTTATT CTTGATTCAG
GTACTAAAGG CGCTGATGTA CGGCTTAATG GCTGGATTAG GGGTTAATCT ATTACAGCAT
TTGTTGCCCA ACGAACCGAC CTTCGGCGCC ACTTTGTATC AAAACGCTTT TGCCGTGGGG
ATGCTATTCG CTGGGTTTGC CGCGGGTGGA ACCATTGAGC TTATGCCGCC TAACTGGCTA
TTTAGCATCA GTGCGATGGT GACGTTGCTG TGCTTACTTA TTCTTCTGGC CACCAAGCGT
GCGTTTAGTA TCACAAGACT ACCTCATGTT GAGAATACTA AGGGCTAA
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| Protein sequence | MSLVDKDSRY YLAGFLNACI MASLMPVLSL YAYRYLDTTA TQLSTLLGGY ALSSIMYAFL
IARIVEQVGK HKHWLLGISF LAAGALVVLA NTQNYLVVCV VMLGVFAPFH ASTALLMGLA
FRYFRKTQIK RVNARVMATV SAAWVVCPSM AFYTVEEFGF SVFLYALALV MPLLTLMFCT
LPASNEKTIQ SDAEIHQPRG QLGVIKNKGL LAPKTKVKNR LGLYLRLLPP VLFFALLSFA
INLYQHILPV YFVEQALPVS LVGTLFMCAA IAEIVLIVRC VNLLSRFTYF QLFIIASVSG
IAFFLLLPLN QSMTYLFLIQ VLKALMYGLM AGLGVNLLQH LLPNEPTFGA TLYQNAFAVG
MLFAGFAAGG TIELMPPNWL FSISAMVTLL CLLILLATKR AFSITRLPHV ENTKG
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