| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0359 |
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| Symbol | |
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| ID | 4173952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 416249 |
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| End bp | 416995 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638053358 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_659944 |
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| Protein GI | 109896689 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.870907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCAAG TCGAAGAATT CTACGAATTA CTAGAAAGTG TAGACGAAAG TAGCTCAATT
GATGCTCTAA AGGAAACTTG CGAAAGGTTC TGTCAGCTAA TTGATATCCC GTTTTATTTA
TTGGGCGTCA TCGGGCAAAC ATCCTCATAC TCACCGACGA TTAGAGTTAT TTCGAATTAT
CCAGAGAAAT GGCTCGAGTT TTACTTTAAG GAAAGTGAAC AACAAAACGA CCCTGTTGTT
AAATACATCT TTGAAAAGCA ATCTCCTATC CGCTGGGACA AACTCGTTGA GTACCAAGAC
TTTTCTTCTA CTAAAGGTTT GCTCGTTTTC GAAAAAGCAG CGGCATATGG CTTGTACAAT
GGGCTAAGCA TCCCTATTCG ATCTACTTCT GAGAATATCG CCGTATTCAG TGTAGCGATA
GATGAACGTT CCGATGCGAA TAGAGTATTA GATAACGCTC AGATGTTTTG CCACACATTT
GCAACGCACT TATTCGAGCG ATACGTTCTG CTTGAGATAA GTGCAAGCGA CGAAACAGAT
AGACGGGAGC TAACGAAAAG AGAACTTGAA TGCCTGTTTT GGGCTTGTGA AGGTAAAACT
GCCTGGGAAA TTTCGCAGAT AATAAATGTT TCTGAGCGAA CAGTTTTATT TCACTTAGGT
AACTCAAACA CCAAGCTAGG CGCTATTAAT CGACAGCATG CTGTCGCGCT AGCGATTAAG
AAGGGCATTA TTAAACCAAA TATCTAA
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| Protein sequence | MMQVEEFYEL LESVDESSSI DALKETCERF CQLIDIPFYL LGVIGQTSSY SPTIRVISNY
PEKWLEFYFK ESEQQNDPVV KYIFEKQSPI RWDKLVEYQD FSSTKGLLVF EKAAAYGLYN
GLSIPIRSTS ENIAVFSVAI DERSDANRVL DNAQMFCHTF ATHLFERYVL LEISASDETD
RRELTKRELE CLFWACEGKT AWEISQIINV SERTVLFHLG NSNTKLGAIN RQHAVALAIK
KGIIKPNI
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