| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0042 |
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| Symbol | |
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| ID | 4172887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 52248 |
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| End bp | 53906 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053040 |
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| Product | peptidase M28 |
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| Protein accession | YP_659628 |
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| Protein GI | 109896373 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAAA TCATGTATTT AGGCATGCTT TCAGCTGGGC TTATGCTTGC TGGTTGCCAA
TCAGCAAATC AAAATGCAAC CCAAGACGCC CCTGTCAAAC AAAGTGTTCA TGCTGATGCA
GAACGAATTA AATCTCACTT ACGTTTTTTA TCTGATGACT TATTAGAAGG CCGTGATACT
GGCTCTCGTG GTCATGAAAT TGCTTCTTTG TACATTGCCT CAGAATTAGA AGGCTATGGC
CTTAAACCTG CTGGCGATGA CGGCAGTTTT CTACAACGCG CGCCTTTTCG CCAAGCATCA
CTTGATCAAG CTTCGCCTTC GTTCGTACTT GAAACTGCCA AAGGCAGTGT CGAATTAGCT
TATCCCAAAC AATACATCAC CAGTGCAAGC CCAGTGAGCG AAATGGCCAG TGTCAAAGGG
CAATTGGTCT TTGCAGGTTA TGGGATTATT GCCCCAGAAC TTGAACACGA TGATTACGCT
GACTTAGACG TAAAAGGCAA AGTTGTAGTG GTGCTTTCTG GTAAGCCGGC TTCTTTCCCA
AGTGAAGAAG GCGCGCATTT TGGTTCAACC AATGAGAAGA AACGCCACGC TGCAGAGCAC
GGCGCCATTG GTTATGTGAC TATTACCACG CCTACTGCTG AGAAAGTGCG ACCTTATCAA
AACCTTCTTA ATTATATTCA CACGCCGACG GTACGCTGGT TAGATCAAAA CGGCCAGCCA
GCCAATGTTT ATCCTGCACT GAAAAACAGT GCTTATTTAA GCAAAGAAGC GGCTGAATTA
TTGTTTGCCA ATGCGGATAT GAATTTAGAG CAGATTTACC AACTACTTGA AGAAGACGAG
TCACCTAAAG GTTTCTCTTT ACCGGTAAGT ATTGATTTCA GTAAGCGTAG CGTGCACAAG
AGCATCAGTA GTCCTAATGT TGCGGCTATA TTGGAAGGCT CAGACCCGAC ACTGAAGAAT
GAGTATATTG TGTATTCAGC CCACTCTGAT CACATCGGGA TCGCCAAAAC AGTCAAGAAA
GACAAGATCA ACAATGGCGC CATGGACAAC GCAACAGGTA CTTCGGTGTT ACTTGAAACC
GCCCGCTTGT TCAGCCAACT GGCTGAGCGC CCTAAGCGTT CAATATTATT TGTTGCTGTC
ACGGCAGAAG AAAAGGGTTT ACTTGGCTCA GATTACTTCG CACAAAACCC CACCGTGGCA
AAAGACGCCA TGGTGGCGAA CGTTAATTTA GACATGCCGA TTTTAACTTA CGAGTTCAAC
GACGTCATCG CCTTTGGTGC AGATCATAGT GATTTGAAAG AGTCGGTGAG TCTTGCAGCA
CAAAAAATTG GTTTAACCCT AAGCCCAGAT CCGTGGCCTG AGCAGGCGTT GTTTACCCGT
TCTGATCACT ACAGTTTTGT TAAACAGGGG GTACCGTCAG TATTTTTAGT GCCTGGTCTG
CAATCAGCCG ACCCAGCAGT TGATGGCAGC AAAAAATTCG GTGAATTTTT AGCAACTAAT
TACCACAAGC CAGGGGATGA TTTTAATCAG CCCTTTAACT GGAAGGCGGC AACTAAATTC
GCCGAAGTGA ATTATTACAT CGGTCTCACC TTGGCTAACC AAGCTAAGCG TTCTAGTTGG
AATGAAGGTG ACTTCTTTGG TGATACGTTT TCTAAGTAG
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| Protein sequence | MRQIMYLGML SAGLMLAGCQ SANQNATQDA PVKQSVHADA ERIKSHLRFL SDDLLEGRDT
GSRGHEIASL YIASELEGYG LKPAGDDGSF LQRAPFRQAS LDQASPSFVL ETAKGSVELA
YPKQYITSAS PVSEMASVKG QLVFAGYGII APELEHDDYA DLDVKGKVVV VLSGKPASFP
SEEGAHFGST NEKKRHAAEH GAIGYVTITT PTAEKVRPYQ NLLNYIHTPT VRWLDQNGQP
ANVYPALKNS AYLSKEAAEL LFANADMNLE QIYQLLEEDE SPKGFSLPVS IDFSKRSVHK
SISSPNVAAI LEGSDPTLKN EYIVYSAHSD HIGIAKTVKK DKINNGAMDN ATGTSVLLET
ARLFSQLAER PKRSILFVAV TAEEKGLLGS DYFAQNPTVA KDAMVANVNL DMPILTYEFN
DVIAFGADHS DLKESVSLAA QKIGLTLSPD PWPEQALFTR SDHYSFVKQG VPSVFLVPGL
QSADPAVDGS KKFGEFLATN YHKPGDDFNQ PFNWKAATKF AEVNYYIGLT LANQAKRSSW
NEGDFFGDTF SK
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