| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2952 |
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| Symbol | |
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| ID | 4115947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2960777 |
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| End bp | 2961832 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638037722 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_645674 |
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| Protein GI | 108805737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACCGGG TGATGGTGGT CTTCGGCGGG CGCAGCGGGG AGCACGAGGT CTCCCTGGCC
TCCGCCCGCT CGGTCATGGA GGGGCTGAGA AAGGCCGGGC ACGAGGTGGT GCCCGTGGGG
ATAACCCGCG AGGGACGCTG GCTCGCGGGC GAGGACCCCC TGCGCGAGCT GGAGGCCGCG
GCCGGCGGAA ACGCCGGCTC CCCATCCGGT CCCCCCGCGC TCGCCGCCCA CCGCCCGCCC
GCCGAGCTGG AGAGCGTGGA CGTGGTCTTC CCGGTGCTGC ACGGCCCCTA CGGGGAGGAC
GGGACCATCC AGGGCCTGCT CGAGCTCGCG GACATCCCGT ACGTCGGGGC CGGGGTGCTC
GCGAGCGCGG TGGGGATGGA CAAGATCACG ATGAAAAAGG TCTTCGCCCA CCACGGCCTG
CCGCAGGTGC GGTGGGTAGA GCTCACGCGC AGGAGGTGGC AGGAGCGCAG AAAAGAGCTG
CTCCGGGAGG TGGAGGAGGA GCTCGGCTTC CCCTGCTTCG TCAAGCCCTC CAATCTGGGC
TCCAGCGTCG GCATAAGCAG GGCCGCGGAG CCCGGGGAGC TCGCGGCGGC GCTCGACGCG
GCGGCGGCGC TCGACCGGCG CATCATCGTG GAGGCTGGGG TGGACGCCCG GGAGGTGGAG
GTCTCCGTGC TCGGCAACGA GGCGCCGGAG GTCTCGGTGC CGGGGGAGAT CCTGATCCGG
AAGGGCGACT TCTACGACTA CGAGGCCAAG TACTCCGAGG GCGGGATGGA GCTCGAGGCC
CCCGCCGACC TCCCGCAGGA GACGGCGGGC GAGATCCGGC GCATCGCCCG GACGGCCTTC
GAGGCCATAG ACGCCGCCGG GATGGCCCGC GTGGACTTCT TCCTCGAGCG CAGGACGGGC
CGGGTGCTGC TCAACGAGAT CAACACCATC CCCGGCTTCA CGGCCACCAG CGTCTACTCG
CGGCTGTGGG AGGCGAGCGG CCTGCCCTAC GAGCGGCTCC TGGAGCGGCT CATAGAGCTG
GCGCTCGAGC GCCACGCCGA GAAGAAGCGG CGCTGA
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| Protein sequence | MYRVMVVFGG RSGEHEVSLA SARSVMEGLR KAGHEVVPVG ITREGRWLAG EDPLRELEAA
AGGNAGSPSG PPALAAHRPP AELESVDVVF PVLHGPYGED GTIQGLLELA DIPYVGAGVL
ASAVGMDKIT MKKVFAHHGL PQVRWVELTR RRWQERRKEL LREVEEELGF PCFVKPSNLG
SSVGISRAAE PGELAAALDA AAALDRRIIV EAGVDAREVE VSVLGNEAPE VSVPGEILIR
KGDFYDYEAK YSEGGMELEA PADLPQETAG EIRRIARTAF EAIDAAGMAR VDFFLERRTG
RVLLNEINTI PGFTATSVYS RLWEASGLPY ERLLERLIEL ALERHAEKKR R
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