Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2410 |
Symbol | |
ID | 4115369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 2421900 |
End bp | 2423876 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037190 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_645150 |
Protein GI | 108805213 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGCCGG GCGGGCTCAG GCTCGGCATA GACGTCGGCG GCACCTTCAC CGACCTGGTC GCCCTGGGCG GCGGCGACGT GATCACCGCG AAGGTCCCCT CCACCCCGCG CGACCAGTCG GTGGGCGTGA TGCGCGCCGT GGAGGCCGCG GGGATCGAGG CGGGCGCGGT GGCGGCGCTG GCCCACGGGA TGACCGTGGC CACGAACGCC CTGCTGGAGC GGCGCGGCGC CAGGACGGCC CTTGTCACGA CGGAGGGCTT CCGCGATGTG CTGGAGATAG CCCGCCAGAA CCGCCCCTCC CTCTACGACC TCACGCAGGA CCGCCCCCCG GCCCTCGTCC CGCGCGGGCT GCGCTTCACC GTGAGGGAGC GCATGGGGCC GGAAGGCGAG ATAGAGCCGC TCGACGAGGC GAGCCTCGAG GAGGCGGTGT CCGCCCTGCG AGAGGCGGAG GTGGAGGCGG TCGCGGTCTG TTTGCTCTTC GCCTTCGCCC ACCCCGAGCA CGAGCGGCGG GTCGGGGCGG CGCTCAGGGA GGCGCTGCCC GGCGTGCACG TCTCGCTCTC GAGCGAGGTG CTGCCGGAGT TCCGCGAGTA CGAGCGGTTC TCGACGACCG CCGCCGACGC CTACCTCGCC CCGAGACTCG CCGCCTACCT GAAGAACCTG GGGCGCAAGG CCGAGGAGGC CGGGCTCCCC GCCCCCCTGA TCATGCAGTC CTCCGGCGGC GTCGCGCGGG TGGAGGACGC GATCTCGGAC GCCGCAGGCT GCGTCCTCTC CGGTCCCGCC GGAGGCGTAG TCGGGGCGGC CTACGTGGGC TCCCTGAGCG GCCACCGCGA CCTCCTCACC TTCGACATGG GCGGCACCTC GACGGATGTG GCCCCCATCC TCGGCGGCGA GGCGCAGACC ACGACCGAGA CGGTCGTCGC CGGCGTCCCC ATAAAGCTGC CGATGGTGGA CGTGCACACC GTGAGCGCGG GCGGCGGCTC GATAGCCTGG GCCGACGCGG GCGGCGCCCT GCGCGTCGGC CCCCACTCGG CGGGCGCCGA GCCCGGCCCC GCCGCCTACG ACAAGGGCGG CGAGGAGCCG ACCGTGACCG ACGCGAACCT CTACCTCGGC TACCTGGCCG ACGGCGCGAG GCTCGGCGGC GAGGTCGTCC TCCGGCGCGA GCTCTCGGAA GAGGCCCTCG AACGGCTCGG CAAGAGGCTC GGCCTCGGGC CGGAGGAGGC GGCCCTGGGC ATCGTGCGGG TCGCCAACGC CCAGATGGCA CGCGCCCTGC GCGTCATCAG CGTCGAGCGC GGCCTCGACC CGCGGGAGTT CGCCCTCTTC GCCTTCGGCG GGGCGGGCGG GATGCACGCC TGCGCGCTCG CCGACGAGCT CGGCATGCGG ACCGTCCTCG TCCCCCGCGC GGGCGGCGTC CTGAGCGCTT TGGGGCTCGC CATCTCCGAC CTCCGCCGCG ACTACGTGCG CCCGCACCTC GCGGCGCTTG TGGGAACGGC CGAAGAGGAG CTCGAGGCGC GCTTCGCGCA GATGGAGAGG GCCGCCGCGA AGGACCTTGA GGGGCCGGAG TACGCCCGCC GGGCCGACCT GCGCTACCGG GGGCAGTCCT TTGAGCTCAC CGTGGAGGCG GGCGACCTGC GGGGGCTCGA GGAGCGCTTC CACGCCGCGC ACGAGCGGCG CTACGGCTAC TGCATGGAGG ACGAGCCCGT AGAGCTCGTC AACCTGCGCC TCACCGCCAC CGTCCCCGTC GAGAAGCCGA AGCTCTCCGA GGGGCCGCCG GAGGGGGAGG CCGGGCGGGG GAAGCGGGAG GCGAACTTCG ACGGGGAGTG GCTGGAGGTG CCGGTGCTGG ACCGCGAGAG GATGGGCGAG GGCTCGGAGG TCGAGGGACC GGCCATTGTG GAGTTCAGGG AGTCCACCTG CGTGGTGCGG CCCGGCTGGG GCGGCAGGGT GGACGGCGTG GGCACGCTCG TGCTGGAGCG GCGATGA
|
Protein sequence | MRPGGLRLGI DVGGTFTDLV ALGGGDVITA KVPSTPRDQS VGVMRAVEAA GIEAGAVAAL AHGMTVATNA LLERRGARTA LVTTEGFRDV LEIARQNRPS LYDLTQDRPP ALVPRGLRFT VRERMGPEGE IEPLDEASLE EAVSALREAE VEAVAVCLLF AFAHPEHERR VGAALREALP GVHVSLSSEV LPEFREYERF STTAADAYLA PRLAAYLKNL GRKAEEAGLP APLIMQSSGG VARVEDAISD AAGCVLSGPA GGVVGAAYVG SLSGHRDLLT FDMGGTSTDV APILGGEAQT TTETVVAGVP IKLPMVDVHT VSAGGGSIAW ADAGGALRVG PHSAGAEPGP AAYDKGGEEP TVTDANLYLG YLADGARLGG EVVLRRELSE EALERLGKRL GLGPEEAALG IVRVANAQMA RALRVISVER GLDPREFALF AFGGAGGMHA CALADELGMR TVLVPRAGGV LSALGLAISD LRRDYVRPHL AALVGTAEEE LEARFAQMER AAAKDLEGPE YARRADLRYR GQSFELTVEA GDLRGLEERF HAAHERRYGY CMEDEPVELV NLRLTATVPV EKPKLSEGPP EGEAGRGKRE ANFDGEWLEV PVLDRERMGE GSEVEGPAIV EFRESTCVVR PGWGGRVDGV GTLVLERR
|
| |