Gene Rxyl_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2260 
Symbol 
ID4115203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2271834 
End bp2272532 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID638037039 
ProductGntR family transcriptional regulator 
Protein accessionYP_645002 
Protein GI108805065 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0845736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTTAA AGGAACTGGC TGAGAACGCA TCGAAAGGGC ATCGGACGGC TCAGGAGATG 
GTCGCCGACG GCCTGCGGGA GGGAATACTA CGGGGGGTGC TGAAGGCGGG GCAACCGCTG 
AGGCAGATGG AGATCGCCGA GCAGTTTGGG GTGAGCAGCA TCCCGGTGCG AGAAGCTTTG 
AGGCAGCTGG AGGGGGAGGG GCTCATGGTC TTCTATCCTC GGCGGGGGGC GGTCGTGTCC 
GAACTCTCGC GGGATGAGGT GCTGGAGATC TGCGAGATGC GCGAGGTTCT GGAGCTGCTG 
GCGCTCAGGA AGGCTTTCCC CAATCTCACC GAGGGGGACC TACAGCGGGC GGAGGAGGTT 
CTGGAGCGGG CAGACGCGCA GACCGACGAG GAGCTTCTCG GTATGTGGGG GGAGGTAAAC 
TGGGAATTCC ACTCCGCTTT GTACCGGCCA GCGAACAGGC CCCAGCTGCT CGGGGTTATC 
AGGAACTTGC ACAACAGGTT CGACAGGTAC CTGCGCATCC ACTTCTCTGC GCTGGACTAC 
AGGGTCAAGG GGCAGCAGGA GCACTGGGAG ATCCTCGAGC GCTGCAAACG TGGGGACGAG 
GGGAGAGCCC TTGAGGAGCT ACGCCGACAC ATCCTGACTG TAAAGGAGAT GCTGCTCGAG 
TACCTGGACG GGGAGGCGGA GGAGGATGAT GCTCCTTGA
 
Protein sequence
MSLKELAENA SKGHRTAQEM VADGLREGIL RGVLKAGQPL RQMEIAEQFG VSSIPVREAL 
RQLEGEGLMV FYPRRGAVVS ELSRDEVLEI CEMREVLELL ALRKAFPNLT EGDLQRAEEV 
LERADAQTDE ELLGMWGEVN WEFHSALYRP ANRPQLLGVI RNLHNRFDRY LRIHFSALDY 
RVKGQQEHWE ILERCKRGDE GRALEELRRH ILTVKEMLLE YLDGEAEEDD AP