| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1991 |
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| Symbol | |
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| ID | 4117579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2010769 |
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| End bp | 2012136 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036778 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_644750 |
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| Protein GI | 108804813 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.603432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGAGA GGAGAAGGGC GGAGAAGACC GGCGGGGTTC TCCGCCGCAG ACTAGGCCGG
AGGGAGTTCC TCAGGCTCGG CGGGGCCTCG CTCGCGGGCG CGGCGCTGCT CGGGAGCGCG
GCCTGCGGCG GGGACGGGGG AGGCCCGCAG CGGGCGGAGG ACGGCAGCAT CCTATTCAAC
TTCTCCTTCG GCCCCGACCC CTCGGGGACC CTGCAGGAGC TGGTCAGGAG GTTCAACGAG
CGGTACAAGG GCGAGTACAA GGCCAACTGG CGGGAGATGC CGGCCCAGAC CGAGCAGTAC
TTCGACCGCC TCAGAACCCA GTTCCAGGCC GGCGGGGGGG ACATAGCCCT CATCGGGGGG
GATGTGATCT GGCCGGCCCA GTTCGCGGCG AACGGCTGGA TCGTGGACCT CTCCGACCGC
TTCCCCGAGT CCGAGAGAGA GAAGTTCCTC GACGGCCCCA TCCAGGCCAA CACCTACGAG
GGCAAGGTCT ACGGGGTCCC CTGGTTCACC GACGCGGGCA TGCTCTACTA CCGCAAAGAC
CTCCTGCAGA AGAGCGGCTT CTCCGAAGCC CCAAAGACCT GGGACGAGCT CAAGGAGATG
GCACTGCGTG TCAAGCAGGA CTCCGGGACC AGGGACGGCT TCGTCTTCCA GGGCGCCGAC
TACGAGGGGG GCGTCGTCGA CGGTCTCGAG TACATCTGGA CGCACGGGGG GGACGTGCTG
GACCCGGAGG ACCCCACGAA GGTCATCATA GACAGCCCCG AGTCGGTGGC GGGGCTGAAG
ACCGAGCGGA GCATGGTGGA GGAAGGGGTG GCGCCAGAGG CGGTGGTCAA CTACGCCGAG
ATGGAGTCGC ACACCGCCTT TCTGAACGGG GATGCCGTCT TCATGCGCAA CTGGCCCTAC
GTCTACGCCC TCTCCAGCGA CCCCAAGCAG TCCAAGATAA AGCCCGAGCA GATAGACATA
GCCCGGCTTC CCGCCGCCGA GGGGCAGGAG AGCGTGAGCG GGCTCGGGGG CTGGAACTTC
TACATCAACG CCGCCATGGA CGAGGAGACC CAGAACGCGG CCTGGGAGTT CATCCAGTTC
GCCACCGCCC CCGAGCAGCA GAAGTTCCGG GCGCTCGAGG GCTCCTTCCT CCCCACGCTG
AAGGAGCTCT ACGAGGACCA GGAGATCCTG GACAAGGTGC CGGTCATAGC GCTCGGCAAG
GAGGCCATCC TCAGCACCAG GCCGCGCCCG GTCTCGCCGT ACTACTCGGA CATGTCGCTC
AGGATGGCCG AGCAGTTCAA CGCCTCCCTC AAGGGCGAGG TCTCCCCCGA GCAGGCCATA
AAGACCCTGC AGGAGGAGCT GCAGAACATC GTGGAGCAGG GAAGCTAG
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| Protein sequence | MEERRRAEKT GGVLRRRLGR REFLRLGGAS LAGAALLGSA ACGGDGGGPQ RAEDGSILFN
FSFGPDPSGT LQELVRRFNE RYKGEYKANW REMPAQTEQY FDRLRTQFQA GGGDIALIGG
DVIWPAQFAA NGWIVDLSDR FPESEREKFL DGPIQANTYE GKVYGVPWFT DAGMLYYRKD
LLQKSGFSEA PKTWDELKEM ALRVKQDSGT RDGFVFQGAD YEGGVVDGLE YIWTHGGDVL
DPEDPTKVII DSPESVAGLK TERSMVEEGV APEAVVNYAE MESHTAFLNG DAVFMRNWPY
VYALSSDPKQ SKIKPEQIDI ARLPAAEGQE SVSGLGGWNF YINAAMDEET QNAAWEFIQF
ATAPEQQKFR ALEGSFLPTL KELYEDQEIL DKVPVIALGK EAILSTRPRP VSPYYSDMSL
RMAEQFNASL KGEVSPEQAI KTLQEELQNI VEQGS
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