| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1964 |
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| Symbol | |
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| ID | 4115756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1985130 |
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| End bp | 1987238 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036750 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_644723 |
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| Protein GI | 108804786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTAA TAATCTCTGA GAAAGCTAAC GCCGCAAGGA AGATAGCCCA GTTTCTCGCC
GAGGGCCCGG TGAAGGAGGG CAAGCACCGC AGCGTGCCCT ACCACACCTT CACCTGGCGC
GGGGAGGAGT GCGTCTCCGT CGGCCTCAAG GGGCACGTGC TCAACCCGGA GTATCCGGAG
GAGTACTCCA ACTGGCAGAA GGTGGACCCC CGGGAGCTGA TAGACGCCAG GATCCTCAAG
TCGGTCTCCG AGAAGGGGGT GGCCGCCGCG GTCAGGTCGC TGGCGAAGAA GGCCGACCGG
GTGATCATCG CCACCGACTT CGACCGGGAG GGCGAGCTGA TCGGGGTGGA GGCCCTCTCG
CTGGCCTTCG AGGCGAACCC GGCGCTCATG GACCACGTGG AGCGGGCCCG CTTCTCGGCC
CTGACCAAGG GGGAGGTGAC CCGCGCCTTC GAGAACCTGG TGGAGGTCTC GAGGGAGCTG
GCCGACGCGG GCGAGGCCCG GCAGGATATA GACCTGATCT GGGGCGCCAC CCTGACCCGG
TGGGTCTCCC GGGCGGTGAA GCGCTACGGG AGCGCCTTCC TCTCCGTGGG CCGGGTGCAG
AGCCCCACGC TGGTGCTGAT CGCGGAGCGC GAGCTGGAGC GCCGGGCGTT CGTCCCGGAG
CCTTACTGGG AGGTGGAGGC GAGGCTGCAG AACGGCGGCG GGCCTTTCGT CGCCCGGCAC
GCCCGGGGGC GCTTCAAGGA GGAGGCGGAG GCCCGCCGGG CGCTGGAGAA CCTCTCGGAG
ACGGCGGTGG TGACGGAGGT TCGCCAGCGG GAGGCCACCC GCCCCGCCCC GGCGCCGTTC
AACACGACGG CCTTCCTCAC GGCGGCGGCG AACATCGGCG TCAGTCCCTC CCGCGCGGCC
CGGATCGCGG AGGACCTGTA CACCGAGGGC TATATCTCCT ACCCGCGCAC GGACAACACG
GTCTACCCGG AGTCGCTGGA CCTGCGGGAG GTGCTGGGCT TCCTCGCGGA GGTCGAGGGC
GTGGGGGACT ACGCCGGGAG GCTGTTGGGG GCCGGGCGGC TGACGCCGAC CCGCGGCCGG
CGCCAGACCA CCGACCACCC GCCGATCTAC CCGACGGGCA GGGCCTCCCG CGCCGAGCTG
CGCGAGGACC AGTGGAAGAT CTACCAGCTC GTCGTGCGCC GCTTTCTGGC GACGCTCTCC
GGCCCGGCGA AGACGCTGCG CACCACGCTG CGCTTCGAGT CGGGCGGCGA GCCGCTGGTC
GCGGGCGGCA CGGTGGTGAC GGAGGAGGGC TGGCTCGCGG TCTACCACTA CGGGCGGCGC
CGGGACGAGG AGCTGCCGCG GCTCTCGGAG GGCGACGAGG TGCGGGTGGC GGAGGCGGAG
CTGCTCGCCA AGGAGACCCA GCCCCCGGGT CGCTACGGCC AGGGTCGGCT CATCCGGCTC
ATGGAGGATC TGGGCCTGGG CACCAAGGCG ACCCGCCCGG GCATCATCCA GAACCTCTAC
GACCGGGGCT ACATCCACGG CGACCCCATC GTCCCCACGG AGACCGGGAT GGCGGTCGCG
AAGGCCCTCA AGGACTTCGC CTCCGAGATA GCCTCCCACG AGATGACCGC GCGGCTGGAG
AAGAGCATGG ACGCGATCTC GGAGGGCCGG GTGAGCAAGG ACTCCGTGGT GGAGGAGTCG
CGGGAGCTGC TCCGCCGGGT CTACGACCAC CTGGAGAGCT CGGAGGAGAA GTTCGCGGAT
ATCGTCTGGA ACGGTATCCG GGGCGACGAG ACGCTGGGGC CCTGCCCGAA CTGCGGCCGC
AACCTGGTGG TGCGCCGCAA CCGCCGCAAC CGGAAGCGCT TCGCCGGCTG CGAGGGCTAC
CCGGAGTGCC GCACCACCTT CCCGCTGCCC CAGAAGGGGG ATATCATCCC CCTGGGCACC
GCGTGCGAGG CCTGCGGGCT CCCGGAGATA AAGGTCCTCG GCGGCCGCAG GCCGTGGGTG
ACCTGTATCA ACATGGACTG CCCGAAGAAG CAGGAGCAGC GGCGCTCCAG AGAGGAGACG
CAGGCGGGAG GTGAGGAGCC ATCGGAGGGG CAGAGAGACC GAAAGAGGCT GGAGAAGTCC
ACCACATAG
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| Protein sequence | MRLIISEKAN AARKIAQFLA EGPVKEGKHR SVPYHTFTWR GEECVSVGLK GHVLNPEYPE
EYSNWQKVDP RELIDARILK SVSEKGVAAA VRSLAKKADR VIIATDFDRE GELIGVEALS
LAFEANPALM DHVERARFSA LTKGEVTRAF ENLVEVSREL ADAGEARQDI DLIWGATLTR
WVSRAVKRYG SAFLSVGRVQ SPTLVLIAER ELERRAFVPE PYWEVEARLQ NGGGPFVARH
ARGRFKEEAE ARRALENLSE TAVVTEVRQR EATRPAPAPF NTTAFLTAAA NIGVSPSRAA
RIAEDLYTEG YISYPRTDNT VYPESLDLRE VLGFLAEVEG VGDYAGRLLG AGRLTPTRGR
RQTTDHPPIY PTGRASRAEL REDQWKIYQL VVRRFLATLS GPAKTLRTTL RFESGGEPLV
AGGTVVTEEG WLAVYHYGRR RDEELPRLSE GDEVRVAEAE LLAKETQPPG RYGQGRLIRL
MEDLGLGTKA TRPGIIQNLY DRGYIHGDPI VPTETGMAVA KALKDFASEI ASHEMTARLE
KSMDAISEGR VSKDSVVEES RELLRRVYDH LESSEEKFAD IVWNGIRGDE TLGPCPNCGR
NLVVRRNRRN RKRFAGCEGY PECRTTFPLP QKGDIIPLGT ACEACGLPEI KVLGGRRPWV
TCINMDCPKK QEQRRSREET QAGGEEPSEG QRDRKRLEKS TT
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