Gene Rxyl_1728 details

Gene Information

• Locus tag: Rxyl_1728
• ID: 4116628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1756459
• End bp: 1758396
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638036526
• Product: PfkB
• Protein accession: YP_644500
• Protein GI: 108804563
• COG category: [G] Carbohydrate transport and metabolism; [S] Function unknown
• COG ID: [COG0524] Sugar kinases, ribokinase family; [COG3892] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.371371
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGG CGCGGGAACG CCCGCTCGAC ATCATCTGCA TCGGCCGCAC CTGCGTGGAC 
CTCTACGCCG AGCAGGAGGG GGCGAGGCTT GAGGACGTGC AGTCCTTCCG CAAGTACGTC 
GGCGGCAGCG CGGCGAACAT CGCCTTCGGG ACCGCCCGGC TCGGGGTGAG GAGCGCGATG 
CTCACCCGGG TCGGGGAGGA GCAGATGGGC CGCTACGTGC GCCGGGCGCT GGAGGAGGCC 
GGGGTGGACG TGAGCCGCGT GCGCTTCGAC CCGGAGCACC TCACCCCCTA CGTGCTGCTT 
GCCGTGCGGG AGACCGAGGG GTTCCCCAGG CTCTTCGCCT ACGGCGAGGC CGCGGACATG 
GCGCTCGAGC CGGGCGACGT GGAGCCCGGG TTCATAGCCT CCGCGAGGGC GCTCCTCATC 
ACCGGCACCC CGCTCTCCCG CGAGGGGAGC CGGGCGGCGT GCCGCAAGGC GGTGCGGGCC 
GCGCGGGAGG CCGGAGCGCG CGTGGTCTTC GACCTGGACT ACCGGCCCGT CTTCTGGGGG 
GTCGTGCCCC GGGAGAGGGG CGGCGAGATG TTCGCCGAGA GCGAGCGCGT CACCCGGGAG 
TACCGGGCGG TGCTGCCGGA GTGCGACCTC GTCGTGGGGA CTGAGGAGGA GATCCGGATC 
GCCGGCGGCT CCGCCGATAC CCGCGAGGCG CTCTTGGGCA TCCGCGAGCG CAGCGGCGCG 
ACCATCGTGC TCAAGGTGGG GGCGATGGGG GCGGTGGTCT TCCCGGACGA GATCCCGGAG 
AAGATCCAGG ACGGCGTGCG GGTCCCGGGC TTCCGGGTGG AGGTCTTCAA CTCCGTGGGG 
GCGGGTGACG CCTTCATGAG CGGCTTTCTC TCCGGCTGGC TGCGGGGGGA GCCGCTGGAG 
GAGTGCCTGA GGCTCGGCAA CGCCTGCGGG GCCATCGTGG TCTCCCGCCA CGGCTGCTCC 
CCCGCCATGC CCACCCGCGA GGAGCTGGGC TACTTCCTCT CTCTCGGCGA GAGCCCCGGC 
GACCTCCGGA AGGACGCCTG GCTCGAGCAC CTGCACCGCG CCACCACCCG CAGGGCCCCC 
GAGGAGCTGC ACGTGCTCGC CATAGACCAC CGCTGGCAGC TCGAGGAGCT TGCCGACGAG 
CTCGGGGTGG AGCGCGGCCG GCTGGCCGAC CTCAAGCGCC TGCTCGCCCG CGCCTTCCGG 
CGCGCGGCCG AGGGGCGCGG GGAGGCGGGC GTGCTGCTCG ACGACGTCTA CGGCCGGCGC 
GCCCTGGAGG AGCTCACCGG GCAGGGCTTC TGGGTTGCGC GGGCCGTCGA GGCGGCGGGC 
TCGCGGCCCG TGGAGTTCAA CGGTGGGGCC AACGTCGCCG CCGCCATAAG GGGCTGGCCG 
CAGGAGCACG TGGTCAAGTG CAACCTGTAC ATGCACCCGC AGGACGACCC GCAGACGCGG 
CGGCTGCAGG AGCAGCGCGT GCTGCAGCTC TACGACGCCT GCGTGAGCAA CGAGCGGCGC 
CTGCTGCTGG AGGTGCAGCC GCCGCGCGGG GCTTCCTACG GGAAAAGCGG CGCGGCGGAG 
GTTCTGGAGC GCCTCTACCG GCTCGGGGTG CGCCCCGACT GGTGGAAGCT TCCGCCGGCG 
CTGGAGCCGG AGGTCTGGGA GGGCATCGGG GAGGTCGTCC GGGGGCACGA CCCCTACTGC 
GCCGGGCTCC TCGTGCTCGG CCAGGGTCTT CCCGAGGAGA AGCTCGCCGG GAGCTTCGCG 
GCCGCATCCT CCGAGCCGCT GTGCAGGGGC TTCGCCATCG GGCGCTCCAT CTACGCCGGG 
CCCGCGCGCC GCTGGCTCGC CGGGGAGATC GGGGACGAGG AGCTCGTCTC CGAGGTCGCC 
GCGGGCTACG GACGCGTCAG CGAGCTCTGG AGGCGGAGGG TGCAACGCAG GGAGAAGCAG 
CCGGAGGCGA AAAGATGA 

 

Protein sequence

MSEARERPLD IICIGRTCVD LYAEQEGARL EDVQSFRKYV GGSAANIAFG TARLGVRSAM 
LTRVGEEQMG RYVRRALEEA GVDVSRVRFD PEHLTPYVLL AVRETEGFPR LFAYGEAADM 
ALEPGDVEPG FIASARALLI TGTPLSREGS RAACRKAVRA AREAGARVVF DLDYRPVFWG 
VVPRERGGEM FAESERVTRE YRAVLPECDL VVGTEEEIRI AGGSADTREA LLGIRERSGA 
TIVLKVGAMG AVVFPDEIPE KIQDGVRVPG FRVEVFNSVG AGDAFMSGFL SGWLRGEPLE 
ECLRLGNACG AIVVSRHGCS PAMPTREELG YFLSLGESPG DLRKDAWLEH LHRATTRRAP 
EELHVLAIDH RWQLEELADE LGVERGRLAD LKRLLARAFR RAAEGRGEAG VLLDDVYGRR 
ALEELTGQGF WVARAVEAAG SRPVEFNGGA NVAAAIRGWP QEHVVKCNLY MHPQDDPQTR 
RLQEQRVLQL YDACVSNERR LLLEVQPPRG ASYGKSGAAE VLERLYRLGV RPDWWKLPPA 
LEPEVWEGIG EVVRGHDPYC AGLLVLGQGL PEEKLAGSFA AASSEPLCRG FAIGRSIYAG 
PARRWLAGEI GDEELVSEVA AGYGRVSELW RRRVQRREKQ PEAKR