Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1460 |
Symbol | |
ID | 4116809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1480908 |
End bp | 1481414 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638036252 |
Product | shikimate kinase |
Protein accession | YP_644234 |
Protein GI | 108804297 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00429425 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGGAGA GGGTGGCCAT CGTGGGGTAT ATGGGCTGCG GCAAGAGCAC CGTGGGGCGG CTGCTCGCCG GCCGGCTCGG CGCGGAGTTC GTGGACCTGG ACGAGGCCGT CGCCCGCAGC GCCGGGCGCT CTATACCCCT GATCTTCGCC GAGCGCGGGG AGGAGGGCTT CCGCGGGCTC GAGCACGGCC AGCTCGCCGA GGCCCTCCGG CCCGGTTCGG CGCCCCGCGT CATAGCCTGC GGCGGCGGGG CGGTGCTGCG CGAGGACAAC CGGCGGCTGC TCCGGGAGCG GGCGGCGACG GTCTTCCTGG AGGAGGACCT GCGGCGGCTC TACGCCCGGA CCCGCGCCGC GGACCGCCCC CTGCGGGGGG CGAGCTTCGA GGAGTTTTGC CGCCGGTACG AGCTCCGGCT GCCCCTCTAC CGGGAGGTCG CCGACCTCAC GGTCGGCGTG GACGGCCGGG GCGCGGAGGA GGTCGCCGAG GAGATAGCCC GGTGGCTGGG CGCGTAG
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Protein sequence | MRERVAIVGY MGCGKSTVGR LLAGRLGAEF VDLDEAVARS AGRSIPLIFA ERGEEGFRGL EHGQLAEALR PGSAPRVIAC GGGAVLREDN RRLLRERAAT VFLEEDLRRL YARTRAADRP LRGASFEEFC RRYELRLPLY REVADLTVGV DGRGAEEVAE EIARWLGA
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