Gene Rxyl_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1301 
Symbol 
ID4116964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1326530 
End bp1327057 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID638036092 
Producttranslation initiation factor 3 
Protein accessionYP_644077 
Protein GI108804140 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.444006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTCA TATCCGCCAG CGGCGAGCAG CTGGGGATAA AGCACATCCG CGAGGCGATG 
GACATCGCCG AGAGGCAGGA CCTCGACCTC GTGGAGGTCG CCCCCAACGC CAACCCGCCC
GTGGTCCGGC TGATGGACTA CGGGAAGTAC AAGTACCAGA AGGAGCAGGC CAGAAAGGCC
GCCCGCAAGA AGCAGGTCAA CATCAACGTC CGGGAGATAA AGCTCCGGCC GAAGATCGGG
GACCACGACT TCGAGACCAA GAAGGGGCAC GTGGAGCGCT TTCTGCGCGG GGGCGACAAG
GTGAAGGTCA CCATCATGTT CCGGGGGCGC GAGGTCCAGC ACCCGGAGCT CGGCGAGCGG
CTCCTGCGGC GGCTGGCCGA CGATCTCTCC GACCTCGGCC GCATCGAGAA CCAGCCCAAG
CTCGACGGGC GCAACATGGT GATGGTGCTG GCCCCCCGCA AGGACGTGGC CAAGGGCGCG
CAGGAGGCGA AGGCCTCCCG CGGGAAGGAG AAGGCCGGCC GCCGTTAG
 
Protein sequence
MRLISASGEQ LGIKHIREAM DIAERQDLDL VEVAPNANPP VVRLMDYGKY KYQKEQARKA 
ARKKQVNINV REIKLRPKIG DHDFETKKGH VERFLRGGDK VKVTIMFRGR EVQHPELGER
LLRRLADDLS DLGRIENQPK LDGRNMVMVL APRKDVAKGA QEAKASRGKE KAGRR