Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1294 |
Symbol | |
ID | 4116957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1316571 |
End bp | 1317833 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638036082 |
Product | geranylgeranyl reductase |
Protein accession | YP_644070 |
Protein GI | 108804133 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.730528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGAGC GGTACGACCT GATCGTGGTG GGGGCGGGGC CCGGGGGCTC CTCGACCGCC TACCACGCGG CGAGGTCCGG CCTCAAGACC CTGCTGCTGG ACCGCCAGAG CTTCCCCCGG GACAAGCCGT GCGGCGACGG GCTCATGCCC CACGCCGCAG CCGAGCTCGC GCTGATGGGG CTGGGAGGGT GGCTCGAGGA GGAACACCAC GGCGCCTTCA CAGGCTTTAC CATCTACAGC GAGACGGCGG TGCTGCGGCA GAAGGTCCCG CCCACGCTGC ACGGTCCGCG CGGCTACGTC GCGCGGCGCA AGGAGACCGA CGCGAGGCTC GCCGGGCGCG CGGCGGAGGC CGGGGCCGAG CTGATGGAGC AGACGCGGGC GGCCAGGCTG CTGCGCTCGG CCGCGGGGAC CGTCTCGGGG GTCGAGGCCG AGCGCTCCGG CGAGAGGGTG CGCTTCGCCG CTCCCCTGGT GGTGGTCGCC GACGGGGTGG GCGGCTTCGC CGCCGGGGGG ATGAAGGCCC GCCAGAACGC CGTGGCCCGC CGCCAGTACT TCCGGGGCGT CTCCGGGCCC GAGCGGGAGC ACCTCCAGAT CTTCATAACC CCCGACATGA ACTCGCACCA CGCGGGGTAC GGCTGGGTCT TCCACTTCGG GGACGGAACG GCGAACGTGG GGGCAGGCGT CTCGACGCGG GCGCTGGAGC GCAGCGGGCG CAACCTCAAG GACTTCTACG ACCGCTTTCT GGAGGAGCCC CGGGTAAGGG AGCAGCTCGC CGGGGCCGAG CCCGAAGGCC CCCCGAAGAG CTGGTCGCTG AAGATGGGCA TGTGGGGCGC CCGGCGGTAC GCGCAGGGGA CGATGCTCGT GGGCGACGCC GGGAGCATGG TCCACCCCAT AAGCGGCGAG GGGGTGGGCT ACGCCCTGGA GTCCGGGCGG CTGGCCGCGG CCTTCGCCCA CGAGGCCCAC GCCCGCGGCG ACTTCTCGGC GCGCCTGCTC TCCGGCTACG AGCGGCGCCT GCGGAGGCTG CGAGCCCGGG AGCACCTCTC CGGCCACGCG CTGGTCAACC TGGTGCCCAA CCTGCGGCTC CTGGAGCCGC TGTTCAAGGC CTGCGAGGTA GACCCGGAGG CCCGGCGGAC GCTCGTGGAG GCGTTCACGG GCGACTCTCC GGTCTACAGC CTGCTGCGGC ACCCCCGGGC GCTGGCCCGG GCGCTGCGGG CGGGGATCAG GGGACGGGCC GGAGCCGCAC GCCGTCCAGG TGGAAGGCGG TGA
|
Protein sequence | MGERYDLIVV GAGPGGSSTA YHAARSGLKT LLLDRQSFPR DKPCGDGLMP HAAAELALMG LGGWLEEEHH GAFTGFTIYS ETAVLRQKVP PTLHGPRGYV ARRKETDARL AGRAAEAGAE LMEQTRAARL LRSAAGTVSG VEAERSGERV RFAAPLVVVA DGVGGFAAGG MKARQNAVAR RQYFRGVSGP EREHLQIFIT PDMNSHHAGY GWVFHFGDGT ANVGAGVSTR ALERSGRNLK DFYDRFLEEP RVREQLAGAE PEGPPKSWSL KMGMWGARRY AQGTMLVGDA GSMVHPISGE GVGYALESGR LAAAFAHEAH ARGDFSARLL SGYERRLRRL RAREHLSGHA LVNLVPNLRL LEPLFKACEV DPEARRTLVE AFTGDSPVYS LLRHPRALAR ALRAGIRGRA GAARRPGGRR
|
| |