Gene Rxyl_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1145 
Symbol 
ID4117377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1174697 
End bp1175326 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID638035935 
Productrhomboid-like protein 
Protein accessionYP_643923 
Protein GI108803986 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.062247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCAG CGGGGGCCGC CGCCGGCGTC CCGTGGAACG TGGCGCTTAT GACCCAGCCG 
CCCGAGGTGC TCGCCCGCGG GGCCCTCGTC CCCCTCTTCG TCGCCCGGGG CGAGGTGTGG 
CGGCTGCTCA CCAGCATGTT CCTGCACGCC GGGTTCATCC ACCTCGCGCT GAACATGCTC 
TCGCTCTACT TTCTCGGCAG CTTCGCGGAG ACGGCCTTCG GCAGGCTGCG CTTCTTCGCC 
CTGTACATGC TCAGCGGGCT CTCCTCGGGC ATAGCCTACC TGTACTTCGG CGGCTTCGCC 
CAGCCCGCGG TCGGGGCCTC GGGGGCCATC TTCGGCCTGC TCGGGGGGGT GCTGGGCTAC 
GCCCTGCGGC GGGGCACCTT CTCCTGGCAG AACCCCCTGA TCCGGCAGCT CCTCATCCTC 
CTGGCCCTCA ACCTCTGGCT GGGCTTCTCG GTGCCGGGGG TGAGCAACAC CGCCCACCTC 
GGGGGGCTGG CGGGCGGGCT CGCCTTCGGC TGGCTGATGG CGCCCGTCGG CTGGGGCCGC 
CCGAAGACCT CCTCGGTGCT GGGGCCCGTG GCCCTGACGC TGGGGGCGGA GGTCATCCTC 
CTGGGCCTCT GGTTCGCCCT TCTCGGCTGA
 
Protein sequence
MAAAGAAAGV PWNVALMTQP PEVLARGALV PLFVARGEVW RLLTSMFLHA GFIHLALNML 
SLYFLGSFAE TAFGRLRFFA LYMLSGLSSG IAYLYFGGFA QPAVGASGAI FGLLGGVLGY 
ALRRGTFSWQ NPLIRQLLIL LALNLWLGFS VPGVSNTAHL GGLAGGLAFG WLMAPVGWGR 
PKTSSVLGPV ALTLGAEVIL LGLWFALLG