Gene Rxyl_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0002 
Symbol 
ID4116152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1853 
End bp2980 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID638034794 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_642795 
Protein GI108802858 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.18991e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGCCG TTTGCAACAC AGGAGTTCTG GCCGGGAAGC TCGCCCTGGT GTCCCGGGGG 
GTTTCCACGA GGTCCCCGGT ACAGGTGCTG AGCGGGGTGC TGTTAGAGGC GCGTGAGGGG
AGGCTCGAGC TCTCTGCGAC GGACATGGAG CTCTCTATCC GGACCCGCTC TCCGGCCGAG
GTGGAGGAGG CGGGCAGGCT GGTCATTCCG GCGCGCATCT TCAGCGACAT CGTGCGTTCG
CTGCCGGAGG GGATGATCTC CATAGAGCAC GACGTGGAGT CCGGAGCCGC CGTGCTCCGC
TCCCGGGAGA ACGAGTACCG CATCCGGGCT TACGCCGCGG AGGACTTCCC CGCGCTGCCG
GAGTTCTCGG AGGAGGGCTC CTTCAGGGTT TCGGGCGAGG CGCTGGTGGA GACCGTGCAG
AAGGTCTCCA GCTCCTACTC CCGGGACGAG ACCCGTCCCG TCCTGACCGG CATCCTCATA
AGCTTCGAGG ACTCCCGGCT CAGGATGGTC ACCACCGACT CCTACCGGCT CAGCATAAAA
GAGACCGAGC TTGCGACCAC CTTCGAGGGG AAGCGGGAGG CCATAATCCC GGCCCGGGCG
ATGCAGGAGG TCGGCAGGAT CTTCTCCGGC TCCGACGAGG AGCAGATAGA GGTGCAGCTC
TCCGAGAACC AGGCCCTCTT CCGCGTCGGG GACGTGCTGC TCGGCACCAA GCTCATAGCC
GGCAACTTCC CCGAGTACCG CCGGCTCTTG CCGGCGGCCT TCGAGCGCGA GATCTCCGTG
AACCGCGACG AGATCGTGGG GAGCCTCCGG CGCGTCAACC TCTTCGCCCA GCGGCAGACC
CCGCCCGTTC CCGTGAGCCT CGTCTTCTCC GAGGGGTCGG TGGAGGTGGT GGTGCGCAGC
GGCGAGGTGG GGGAGGCCCA CGAGCGCATC CCGGCCAGCA GCGAGGACGA CTTCACCATC
TCCTTCAACC CCGGCTACCT CCTGGACGGC ATCTCCGCGG TCGACACCGA GAAGGTCGTC
TTCAAGTTCA ACGAGCCTCT CAAGCCCGGC CTGATCGTGC CCAACGGGGA GGAGGAGCCT
GACTTCCGCT ACCTGATTAT GCCGATGAGG GATCCCTCCC GCGCCTGA
 
Protein sequence
MRAVCNTGVL AGKLALVSRG VSTRSPVQVL SGVLLEAREG RLELSATDME LSIRTRSPAE 
VEEAGRLVIP ARIFSDIVRS LPEGMISIEH DVESGAAVLR SRENEYRIRA YAAEDFPALP
EFSEEGSFRV SGEALVETVQ KVSSSYSRDE TRPVLTGILI SFEDSRLRMV TTDSYRLSIK
ETELATTFEG KREAIIPARA MQEVGRIFSG SDEEQIEVQL SENQALFRVG DVLLGTKLIA
GNFPEYRRLL PAAFEREISV NRDEIVGSLR RVNLFAQRQT PPVPVSLVFS EGSVEVVVRS
GEVGEAHERI PASSEDDFTI SFNPGYLLDG ISAVDTEKVV FKFNEPLKPG LIVPNGEEEP
DFRYLIMPMR DPSRA