| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3342 |
|---|
| Symbol | |
|---|
| ID | 4112174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3542028 |
|---|
| End bp | 3543125 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638032474 |
|---|
| Product | bifunctional RNase H/acid phosphatase |
|---|
| Protein accession | YP_640505 |
|---|
| Protein GI | 108800308 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI
[COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.135995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTTC TCGTCGAGGC CGACGGCGGC TCGCGGGGCA ACCCCGGACC GGCGGGCTAC
GGCTCGGTGG TCTGGTCGGA GGACCGGTCG TCGGTGCTCG CCGAGGCCAA ACAGTCGATC
GGCCGGGCCA CCAACAACGT CGCCGAGTAC CGCGGGTTGA TCGCCGGTCT CGAGGAGGCC
GCCAACGTCG GCGCCACCGA GGTCGCGGTG TCGATGGACT CCAAACTCAT CGTCGAGCAG
ATGGCGGGCC GCTGGCGGGT CAAACACCCC GACCTGATTC CGCTGTATCA GCGGGCGCGG
GAACTGGCCG AGGGGTTCGA CCGCGTCACG TATTCGTGGA TTCCGCGGGC CGCCAACGCC
CGCGCCGACC GGCTGGCCAA CGAGGCGATG GACGCCGCGC AGGGTATCGA CCCCCCGCCG
CGCACGGCCG CCCCCGCCGC GTCCACCCAC ACCCCCACGT CACCGGCCGG CTGGACGGGT
GCGCGGGGGG AGCCGACACG GTTCCTGCTG CTGCGCCACG GACAGACCGA GCTGTCGGTG
GAGCGCCGGT ACTCCGGGCG CGGCAACCCG GCGCTGACCG AACTGGGCCG CAGCCAGGCC
GGCGCCGCGG CCGCCTACCT CGCGGGTCGG GGCGGCATCG ACGCCGTCAT CACCTCACCG
CTGCAGCGCG CCTACGACAC CGCGACCGCT GCCGCCAAGA CGCTCGGACT GGACGTCACC
GTCGACGAGG ATCTGATCGA GACGGATTTC GGCGCCTGGG AAGGGCTGAC ATTCGGCGAA
GCGTCGCAAC GGGATCCGGA GCTGCACGGC CGCTGGCTGC GCGACACCAG CGTCGACCCG
CCCGGCGGGG AGAGCTTCGA CACCGTCGCC CACCGGGTGC GGCGGGCCCG CAACCGCATC
ATCGCCGACC ACGGCGCCTC GACGGTGCTG GTGGTCTCCC ACGTCACGCC GATCAAGACG
ATGCTGCGGC TGGCGCTCAA CGCCGGGGAA GGCATCCTGT ACCGGCTGCA CCTGGATCTC
GCCTCGCTGA GCATCGCGGA GTTCTACCCC GACGGTGGAT CGTCGGTGCG GCTGGTCAAC
CAGACCGCCC ACCTCTAG
|
|---|
| Protein sequence | MKVLVEADGG SRGNPGPAGY GSVVWSEDRS SVLAEAKQSI GRATNNVAEY RGLIAGLEEA
ANVGATEVAV SMDSKLIVEQ MAGRWRVKHP DLIPLYQRAR ELAEGFDRVT YSWIPRAANA
RADRLANEAM DAAQGIDPPP RTAAPAASTH TPTSPAGWTG ARGEPTRFLL LRHGQTELSV
ERRYSGRGNP ALTELGRSQA GAAAAYLAGR GGIDAVITSP LQRAYDTATA AAKTLGLDVT
VDEDLIETDF GAWEGLTFGE ASQRDPELHG RWLRDTSVDP PGGESFDTVA HRVRRARNRI
IADHGASTVL VVSHVTPIKT MLRLALNAGE GILYRLHLDL ASLSIAEFYP DGGSSVRLVN
QTAHL
|
|---|
| |