Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5493 |
Symbol | |
ID | 4097039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 13187 |
End bp | 14395 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638018772 |
Product | response regulator receiver protein |
Protein accession | YP_625338 |
Protein GI | 107028243 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00416697 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAACA TCCTCGTAGC TTCCGACGAT ACCGCGCGGC TCACGCAGAT CGCGCGTCTC GTGGCCGACT GCGGACGCTA TCGCACGACG CGCGCCACCG GCCGCCCGTC GCAGATCGAG CATCGCACCG ACGGGCTCGA TGCGTTCGAC ATCCTGCTGA TCGACGGCAC GTCGCTGGAG CCGTCCGAGC TGTCGGCGAT CGAGCGCATC TGCCGTGCGC ATGCGGGCCT GACCTGCATC CTCGTGACGG CCGACGCATC GCCGCACGTG CTGCTCGACG CGATGCGCGC GGGCGCCCGC GACGTGCTGC AGTGGCCGCT CGATCCGCAG GCGCTCGGCA ACGCGCTCGG GCGGGCGGCC GCGCAAAGCA CGCGGCGCGA TACCGACGAC ACGCGGATCG TGTCGTTCAT GTCGTGCAAG GGCGGGGTCG GCACGAGCTT CGCGGCCGGC AACATCGCGT TCGAGATCGC GGAGGGCTTC AAGCGCCGCG TGCTGCTGAT CGACCTGAAC CAGCAGTTCG CCGACGCGGC ATTCCTCGTC AGCGACGAAA CGCCGCCGTC GACGCTGCCG CAGCTGTGCG CGCAGATCGA GCGGCTCGAC GGCGCGTTTC TCGACGCGAG CGTCGCGCAC GTGACGGAAA ACTTCCACGT GCTGGCGGGC GCCGGCGACC CGGTCAAGGC CGCCGAGATG CGCGAGGACG CGCTCGAATG GATTCTCGGC GTCGCCGCGC CGCGCTACGA CTTCGTGATC TTCGACGTCG GCGTCGGCAT CAACCCGCTG TCGATGGTCG CGCTCGATCG CAGCGACCAG ATCCAGATCG TGCTGCAGCC CGCGATGCCG CACGTGCGCG CCGGCCGCCG GCTGCTGGAA ATTCTCGTGT CGCTCGGCTA CTCGACCGAC CAGTTGCGGC TGATCGTGAA CCGCACGACC CGCGCGAGCG AGCGGACCCG CGCCGCGCTC GAGGAAGTGC TCGGCCTGCA CGCGGCCTGC ACGATTCCCG ACGACGCCGA CACCGTGCTC GAAGCGATCA ACCAGGGCCA TCCGGTGTCG CGGCTCGCGC GCGGCTCGGC GGTCGTACGG GCGTTGCAGG GCTGTGCGAA GCAACTCGTC GACGGCGAAG TGCGCGCGGG ACGCGGCGCG ACGCACAGCG AACCGTTGAT GTCCCGGCTG TTCGGCCGCA AGGCCACGCC GAAGCTCAAG TCGATGTAA
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Protein sequence | MINILVASDD TARLTQIARL VADCGRYRTT RATGRPSQIE HRTDGLDAFD ILLIDGTSLE PSELSAIERI CRAHAGLTCI LVTADASPHV LLDAMRAGAR DVLQWPLDPQ ALGNALGRAA AQSTRRDTDD TRIVSFMSCK GGVGTSFAAG NIAFEIAEGF KRRVLLIDLN QQFADAAFLV SDETPPSTLP QLCAQIERLD GAFLDASVAH VTENFHVLAG AGDPVKAAEM REDALEWILG VAAPRYDFVI FDVGVGINPL SMVALDRSDQ IQIVLQPAMP HVRAGRRLLE ILVSLGYSTD QLRLIVNRTT RASERTRAAL EEVLGLHAAC TIPDDADTVL EAINQGHPVS RLARGSAVVR ALQGCAKQLV DGEVRAGRGA THSEPLMSRL FGRKATPKLK SM
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