Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3127 |
Symbol | |
ID | 4082383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3280090 |
End bp | 3281868 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638011512 |
Product | heparinase II/III-like protein |
Protein accession | YP_618163 |
Protein GI | 103488602 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGGGA GACCGCTGAC CACCGCCCCC GCCGACCCGC CGCTCGATCC CGGTTACGAC GCCGCGCCGA TCGACGACAC GATCGAACCC GGCAAACGCC TGATCCGCCT GCCCGCCGAC AAGGGGCTGT CGCTCGGCGA TCGCGTCGCC AATGCGATCA CCCGCCTGAC CTGGCGCACC CCGCTCCACG CGCTGCGGCT CAAAGGGCGC TTTCCGCTGA AGCTGCTCGG CGTACCCGCC GACCCGGTGC CGGGCGATCC GCGTGCGGGC ACCGCGATCC GTGCCGGCCA TTTTCTGCAT CGCGGGCTGA AACTGCCGCT CGGCGATCTT GATTTCGCGT CGCTGACCGT CGCGCCGGCC TTTGCCGATT ATCTGCACAG CTTTGCCTGG CTGCGCGACC TCGCCGCCAC CGGCACCCGC GCCGATGGCG CGCCGATCGC CGAAGCCGTG GTGCGTCACT GGCTCGGCAC GCATGGCGAG ACGGTGAGCG AACCCGCGTG GCGCGCCGAC AATACCGGCT GGCGTATCCT CTTCTGGGCC GCTCACGCGC CGCTCATCCT GTCGTCGAGC GACCTTGTCT ATCGCTCGGC GGTGCTCAAC CACCTCGCGC GCGCGGCGCG GCACCTCGAC CGCGTCGCCG ACAAGACGCG GCCGGGCACG GGACAAATGG TCGCGTGGGT CGGCATCGTC GCCGCGTCGC TCCTCATGCC CGGCGGCGAG CCGCGGCAGG TGTTCGGCGA AGCGGGGCTA CGCAAGGTGC TGGAAACCAG CTTTTATGCC GACGGCGGCA ATATCTCGCG CTCGCCGCAG GCGCAACTCG ACGCGATCAT GGCGCTGTCG ATGCTCGCGC GCACCTATGA CATGCGCCGC ATGGAGGTGC CACCCTTTGT GCAGGAAGTG CTCGCGCGGG CCGTCCCCGC GCTGCTCGGG CTGCTCCACG CCGATGGCGG CATGGGCTGC TGGCAGGGCA GCGGTGCGAC CTCGGCGGCG CATGTGCAGG CGATCGTCGC GGCAAGCGGC GTGCGCACCC GGCCGCTGAA ACAGGCGCGC GACTGGGGCT ATCAGCGGCT TGTCGCGAAC AAGGCGGTGC TGCTCGCCGA CGCCGCGCCT CCCCCCATTG CCCGGGTGAC CGAGGCGGGC TGCGCTTCGA CCCTCGCCTT CGAACTCAGC GATGGCGACG AACGGATCGT CGTCAACTGC GGCGGTGCGG CGCTCACCGG CGCGACGATC CCCGCCGACC TTGCGCGCGG GCTGCGGACA ACCGCGGCGC ATTCGACGCT GACGCTGGCC GACAGCAATT CGACCGCAAT CCTGCCCGGC GGCGCGCTTG GCAAGGGCGT CACCGAGGTC GAGCTTGATC GCCGCGAAAC ACCGCAGGGC AGCCGGCTCG AGATGAGCCA CGACGGCTAT GCACGCCGCC ACGGGCTGAT CCACCGCCGC CTGCTGATCC TCTCACCCAA CGGGCGCGAA CTGCGCGGCG AGGACATGCT GCTGCCCGCC CCGCGCACGC GGCGCAAGGG CGACAAGGCC TTCACGATCC GCTTTCACCT CGGCCGCAAC ATTTCGGCCA GCCTGACCGC CGACGGGCTG GGTGCGCTGC TGCGCCTCGG CGGCGGGCCG CTGTGGCAGT TCCGCACCTC CGAAGGCGAG CTGGCCATCG AGGAAAGCCT GTGGGTCGAT GGCGATGGCC GCCCCTACCC GACCGAACAG CTTGTCGTCA CGGGCACCGC CCCCGCGGGC GGGGTGAGCG TGGGGTGGAT ATTCAAGCAT ATCGGGTAG
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Protein sequence | MEGRPLTTAP ADPPLDPGYD AAPIDDTIEP GKRLIRLPAD KGLSLGDRVA NAITRLTWRT PLHALRLKGR FPLKLLGVPA DPVPGDPRAG TAIRAGHFLH RGLKLPLGDL DFASLTVAPA FADYLHSFAW LRDLAATGTR ADGAPIAEAV VRHWLGTHGE TVSEPAWRAD NTGWRILFWA AHAPLILSSS DLVYRSAVLN HLARAARHLD RVADKTRPGT GQMVAWVGIV AASLLMPGGE PRQVFGEAGL RKVLETSFYA DGGNISRSPQ AQLDAIMALS MLARTYDMRR MEVPPFVQEV LARAVPALLG LLHADGGMGC WQGSGATSAA HVQAIVAASG VRTRPLKQAR DWGYQRLVAN KAVLLADAAP PPIARVTEAG CASTLAFELS DGDERIVVNC GGAALTGATI PADLARGLRT TAAHSTLTLA DSNSTAILPG GALGKGVTEV ELDRRETPQG SRLEMSHDGY ARRHGLIHRR LLILSPNGRE LRGEDMLLPA PRTRRKGDKA FTIRFHLGRN ISASLTADGL GALLRLGGGP LWQFRTSEGE LAIEESLWVD GDGRPYPTEQ LVVTGTAPAG GVSVGWIFKH IG
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