Gene Sala_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2937 
Symbol 
ID4080979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3081998 
End bp3082351 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID638011322 
Productflagellar hook-basal body complex protein (FliE) 
Protein accessionYP_617975 
Protein GI103488414 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.762036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TTGACCAGAG CCGGCTGTTG CAGATGCGCA GTTCGATCCT CAATCAGAAT 
CAGGCGCTGC AACGCGCCGC GGGGCGGGGC GGGATCGACG GCGGCGCAGG CGCTGTCGAC
GGCAGCGCGG GCGCTCCCGA TTTCGGCGCC GCGATCAACC ATGCGCTGCA ACAGGTCAAC
GCCCAGCAAG CAAAGGCGAG CGAAATCAGC GAAGCCTATG AGCGCGGCGA CACGCACGAC
ATCGTCAGCG TGATGATCGA GCGGCAGAAG GCCTCGCTCG GTTTCGAAAC GACGCTGCAG
GTCCGCAACA AGCTGCTCTC CGCCTATCGC GACATCATGA ACATGCCGGT GTAA
 
Protein sequence
MSTIDQSRLL QMRSSILNQN QALQRAAGRG GIDGGAGAVD GSAGAPDFGA AINHALQQVN 
AQQAKASEIS EAYERGDTHD IVSVMIERQK ASLGFETTLQ VRNKLLSAYR DIMNMPV