| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2433 |
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| Symbol | |
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| ID | 4081139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2571241 |
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| End bp | 2573355 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638010812 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617474 |
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| Protein GI | 103487913 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.1738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT TATACTGTTA TTCGTCGACG AAGCGCGCAA TGCAGCGAAG CTCGATGGCG
GCGATTGCGG TGGCGGTCGC GTTTCCCGCG CAGGCTCAGG AAGCCCAGTC GGACGGCCTC
GCCGAGATCA TCGTAACGGC GGAGAAGCGC GAGGAAAATC TGCAGTCCGT TCCCGTCTCG
GTGACAGCGA TGACCGGCGA GGCGCTTACG GCAACGGGCA TATCAAACGT CGAAGACCTC
CAATTTTTTG TGCCGGGCGT GTCGATCACC AACGATTCCA TGGCGATCAT CAATATTCGT
GGAATTGGCA CCTCGGCGTT CGGCGTTGCG ACCGACCCCA GCACGACAGT CCATTATGAC
GGCGTCTACA TCTCGCGCCC GACCACAAAC TATCAGGATT TGTTCGACGT CGAACGCATC
GAGGTGCTGC GCGGACCGCA AGGCGTTCTC TTCGGTCGCA ACTCCGCCGG CGGCACACTC
AACATCATTT CCAAAATGCC TACGGAGGAT TTGACTGGCG CGCTGGGACT CACCGTCGGA
AATTACGAGA AGCGCTCGCT GAGCGGCACG ATTTCTGGAC CGCTTGGAGC GGGCGTCCGA
GGCCGCCTCA CCTTGCTTGC CAACCAGCGC GACGGCATCT ACCGCGACGT CGTCTCGGGA
CGGCGATACC AAAACGAAGA TAATCTCGCT GGACGACTGA CGCTTGCGAT TGACGCGAGC
GACCGTCTTG AGATCGTGTT GCGGGCGGAT GCCAGCCGTG ATCGCGAGAC CGGCGCGCGG
TCTGTTCGGC CCTTTTATCC GCAAGGCTTC GTCGATGCGG GGGCGACGAT CCCGGCCAAT
GACAAAGAGG CCGCACTCGA CCGCCTGCCG CGTTACGATG TCGATGCCTG GGGCGTGTCC
TCGACCATGA ACTGGGACGG CGGCCCGGTC ACGCTCCGCT CGATTACGGC GCTGCGCAAG
AGCAAGGTCG TCCAGGCGCT CGACGTTGAC TCGACTGACC TCTTCCTCCG CGATATCGAA
TTTTACGAAC GTTCCCGCAG TTTCACGCAA GAGTTCCAAC TTCTCAACAA CGATGCGGAC
AAGCTGCGCT GGATCGTCGG AGCATTCTAT CTGAATGAAA AGGGCAACGA CGAAATACGG
ATCATCGAAC CGGGTCGTCG GCTCGCGATC CCGGAAAACA ATACGACGAA TGCATTCGCG
CTCTTCGGAC AAGCAAGCTA CGAACTCATC GACCGCCTGC GATTGACCGG AGGGCTTCGA
TACTCATACG AAAAAAAGGA TTTCGGATAT CGTGTCCTGC TGAACGGAAA TCAGGTCGAT
GCCGGTCAGC CCAAATCATC CTGGACCGCC TGGACTCCGA AAATTGGGAT CGATTACGAC
CTTGCCGATG ACGTCATGGC TTATGCGTCG GCAACCCGCG GGTTCAAATC GGGTGGATTC
CAGCTGGGAG ACGGGCGGCC TTTCCTCCCG GAGTATGTCT GGAGCTACGA AGTCGGCTTG
AAGTCGACGC TCCTCGATCG CCGGCTTCGA GCTAATTTTT CGGCCTTCTA TTATGATTAC
ACCAATCTTC AGGTGGTCGA GTATAATAAT GGCGTTGCCA GTACCACCAA CGCCGGCAAG
GCGACGATCA AGGGCGTTGA AGCGGAACTG ATGGCACGGC CGTTCGATCG CCTGACGCTT
ACATCCACGA TCGCTTATCT CGATGCGCGC TACGATGTCT ATTTTGACGA CGTCGGCGCA
AGCCTCAAGG GCAAGCGGCT GCCGAACGCG CCGAAGTGGA ACATCACTCT CGGCGGAGAA
TATAAGGCCT CCCTGGGCGG CGGAATGCTG ACATTACGGA CCGATATCTC CTGGCGCGAC
AGCATCTTTT TCAAGCCCAG CAACAATCCG CTTTTTTCCG GAAACGCCAC GACCCTTATA
AATGGGCGTG TCGCATGGCA GCCGGCGAGC GAAGCGTGGG AAATTGCGCT TTATGGCCGA
AATCTCACCA ACGAGCGCTA TGTGAGCTAT AGTACGATCG GGACGGACGC GACGGGTGTC
TCGAACCCTA CTCTTCCGCT CTACATCTAC GGCGAGCCGC GCCAGTACGG ATTGCAGCTG
CGCTACTTTT TCTGA
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| Protein sequence | MNKLYCYSST KRAMQRSSMA AIAVAVAFPA QAQEAQSDGL AEIIVTAEKR EENLQSVPVS
VTAMTGEALT ATGISNVEDL QFFVPGVSIT NDSMAIINIR GIGTSAFGVA TDPSTTVHYD
GVYISRPTTN YQDLFDVERI EVLRGPQGVL FGRNSAGGTL NIISKMPTED LTGALGLTVG
NYEKRSLSGT ISGPLGAGVR GRLTLLANQR DGIYRDVVSG RRYQNEDNLA GRLTLAIDAS
DRLEIVLRAD ASRDRETGAR SVRPFYPQGF VDAGATIPAN DKEAALDRLP RYDVDAWGVS
STMNWDGGPV TLRSITALRK SKVVQALDVD STDLFLRDIE FYERSRSFTQ EFQLLNNDAD
KLRWIVGAFY LNEKGNDEIR IIEPGRRLAI PENNTTNAFA LFGQASYELI DRLRLTGGLR
YSYEKKDFGY RVLLNGNQVD AGQPKSSWTA WTPKIGIDYD LADDVMAYAS ATRGFKSGGF
QLGDGRPFLP EYVWSYEVGL KSTLLDRRLR ANFSAFYYDY TNLQVVEYNN GVASTTNAGK
ATIKGVEAEL MARPFDRLTL TSTIAYLDAR YDVYFDDVGA SLKGKRLPNA PKWNITLGGE
YKASLGGGML TLRTDISWRD SIFFKPSNNP LFSGNATTLI NGRVAWQPAS EAWEIALYGR
NLTNERYVSY STIGTDATGV SNPTLPLYIY GEPRQYGLQL RYFF
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