Gene Sala_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2175 
Symbol 
ID4080209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2285367 
End bp2285840 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID638010553 
Producthypothetical protein 
Protein accessionYP_617217 
Protein GI103487656 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAT TTGTATCGGG CCTGCTTGCT GCCGCCCTGT TGACCGCGGG GTCGACGGCG 
GAGGCCATGG GCCGGGTCAT TCCGAACGAT CTGTCCAACT GCCGCAGTGG GCCGTCGACG
CTTGTCCAGA TCGACGGGAT CAAGACGTCG AGCGGCAAGA TCCGCGTGCA AAGCTATCGC
GGAACGTCGG CCGACTGGCT GGAAAAGGGT CGCTGGCTCG CGCGTATCGA AGTGCCGGCG
CGTGCCGGGT CGATGACCGT CTGCGTGCCG CTGCCCGAAG CCGGCGTGTA CGGCATCGCG
GTGCGCCACG ACGTCAACGG CAATGGCAAG ACCGACATCA GCAAGGATGG CGGCGGCATG
TCGAACAATC CCGGCATCAA CATCTTCAAC CTTGGCAAGC CGAGTTACAA GAAGACCGCC
TTTTCGGTCG GCGATGCGCC GCGGACCATC TCTATCACGA TGAAATATAT GTAA
 
Protein sequence
MSKFVSGLLA AALLTAGSTA EAMGRVIPND LSNCRSGPST LVQIDGIKTS SGKIRVQSYR 
GTSADWLEKG RWLARIEVPA RAGSMTVCVP LPEAGVYGIA VRHDVNGNGK TDISKDGGGM
SNNPGINIFN LGKPSYKKTA FSVGDAPRTI SITMKYM