| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1588 |
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| Symbol | |
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| ID | 4083025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1663976 |
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| End bp | 1664749 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009957 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_616634 |
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| Protein GI | 103487073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.101952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTC ACACATCGCC GCGACATTCC GTGCGAGTTT GGAGCTGGTG CCCGGCGACT
TGGGCAATGT TACTTGTCTG CCTGTTCCCG GCCGCGATGC TGGCAGGGTG TGCTGCACCG
CAACTGGGTG GCTCGCCACA GGTCCGCGTC ATTCCGGCAG ACAGCCTGCC GGAACCCGGC
GGCGCTGACA CGCTATCCGA CGAGCGACCC TATCTTATCG GGCCTTTCGA CAGGCTGACT
ATCGACGTTT TCGGCATTCT CGAACTCAGC AAGCGCGAAG TGCAGACGGA TGCGAGCGGC
CGTTTTTCCT TTCCGCTCGC CGGCGTGATC CAGGCTGCCG GAAAGACTCC GGCCGAGGTC
GAGCAGTATC TTCGCTCCAA GCTGATGCAG GCACATATTC GTGACCCGCA GGTCACCGTC
AACCTGAAGG AGACGGGCAG CCAGTTTGTC ACCGTTGAGG GACAGGTCCG CAAGCCCGGT
CTCTACCCGG TGGTCGGCAA GATGACCTTG CTTCGTGCGA TTGCCACGGC CGAAGGTACC
GCCGAGTTCG CACGTCTTGA CGAGGTCGTC GTGTTCAGGA CGGTTGAAGG TCAGAAATAT
GCTGCGCTGT TCAACCTGAA AGCTATTCGC CGCGGGGCCT ATGCCGACCC CGACATTCAT
GCGAACGACG TCGTTGTTGT GGGCGATTCC GCGTCGCGCC GTCTTTTCCG TGATGTCCTG
CAGGTCGTGC CCCTGTTGAC AACGCCGATT GTCGTTGCAT TGCAGAACAA CTGA
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| Protein sequence | MPVHTSPRHS VRVWSWCPAT WAMLLVCLFP AAMLAGCAAP QLGGSPQVRV IPADSLPEPG
GADTLSDERP YLIGPFDRLT IDVFGILELS KREVQTDASG RFSFPLAGVI QAAGKTPAEV
EQYLRSKLMQ AHIRDPQVTV NLKETGSQFV TVEGQVRKPG LYPVVGKMTL LRAIATAEGT
AEFARLDEVV VFRTVEGQKY AALFNLKAIR RGAYADPDIH ANDVVVVGDS ASRRLFRDVL
QVVPLLTTPI VVALQNN
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