Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1016 |
Symbol | |
ID | 4081704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1047965 |
End bp | 1049482 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009376 |
Product | hypothetical protein |
Protein accession | YP_616066 |
Protein GI | 103486505 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.349259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTC CTATCGGGGC ATCGCTCCTG CCCCTCGCGA CGCTGATCGC CGCCTGCGCC GCCGCACCCG CGCCCTCCGC GCCCGTGCCG CCCGCTCCTG CGGTGCTGGC ACCGATGAGC GAGGCGGCTT TTACCGAAGA ATTGACCGAG CGGACCTTCC GCTATTTCTG GGACACGACC GACACGAAAC GCTGTCTCGC GCCCGACCGC TGGCCGAGCA ATCCCTTTTC GTCGATCGCG GCGACGGGCT TTGCGCTCAC CGCCTATGGC ATCGGCGCCG AGCGCGGCTA TGTGACGCGC GAGGCCGCGG CCGAGCGGAC GCGCGACTGC CTGCGCTTTT ACTGGACGGC ACCGCAGGGC CCCGCCGTCA CCGGCATGAC GGGGCACAAG GGGTTTTTCT ATCATTTCCT GAACAATGAG GACGGCACGC GGCGCGGCAA GACCGAACTG TCGACGGTCG ATACGTCGCT GCTGCTTGGC GGTGTCTTGT TCGCGCAAAG CTATTACGAT CGCGAGACGC CGGTCGAGAC CGAGATTCGC GACCTTGCGG AAAAGATCTA CCGCCGCGTC GACTGGACCT TTGTTCAGCG CGAAAATAGC AGCATTCCGT CTGCCAACAG CGGCGGGCGG AAAGCGATCG CGATGGGCTG GTATCCCGAA CGCGGCGAGG GCGGCGATTT CGGGACGCAC GACTGGGTCG GCTATAATGA GGGGATGCTC GTCTATATCC TCGCGCTCGG GTCGCCGACG CACCCCGTCG GCACGGACGC GTGGGAGGAG GGCTGGGCCG CCGATCTCGA AAAGGATTGG GGCAGCTATT ACGGGCAGGA ACACCTCCAG TTCGAGCCGC TGTTCGGGCA CCAGTACAGC CATGTCTGGG TCGATTTCCG CGGCATCCGT GATGCGTTCA TGCGCGGCAA GGGCATCGAC TATTTCGAGA ACAGCCGCCG TGCGACGCTG GCGCAGCGCG CCTATGGCGC CGACAATCCG AACAAATGGG TGGGGTATAG CGCCGACATC TGGGGCTGGA CCGCGTCGGA CGGCCCCGGC TATTCAAAGG GGCGGTACAG CGTGAACGGC ACGCCGCGCG ACTTCAACGG TTATATGGCG CGCGGCGTCA GCGCGATCCG CGTCGTCGAC GACGGCACGA TCGTCCCGAC CGCGGCGGGC GGCTCGATCC CCTTTGCGCC CGAAGTGACG ATCCCGGCGT TGATGACGAT GCGCACGACA TTCGGGCCGC GCCTCTATAC GCGCTATGGC TTTAAGGACG CGATCAACCC CAGCTTCACC TTCACCGATT TCGGATCGAA GTCGGGCGAG GTCGATCCGG TCCACGGCTG GGTCGCGCGC GACTATATCG GCATCGACCA GGGACCGATT CTCGCGATGA TGGAAAATCA TCGCAGCGGG CTGGTGTGGA AGGTGATGCG CAGGAATCGG CATATCGTGC GCGGACTGAA ACGCATCGGC TTCACCGGCG GCTGGCTCGA TCAGGCGCAG CCAGCAAAGG GCGAATAG
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Protein sequence | MSVPIGASLL PLATLIAACA AAPAPSAPVP PAPAVLAPMS EAAFTEELTE RTFRYFWDTT DTKRCLAPDR WPSNPFSSIA ATGFALTAYG IGAERGYVTR EAAAERTRDC LRFYWTAPQG PAVTGMTGHK GFFYHFLNNE DGTRRGKTEL STVDTSLLLG GVLFAQSYYD RETPVETEIR DLAEKIYRRV DWTFVQRENS SIPSANSGGR KAIAMGWYPE RGEGGDFGTH DWVGYNEGML VYILALGSPT HPVGTDAWEE GWAADLEKDW GSYYGQEHLQ FEPLFGHQYS HVWVDFRGIR DAFMRGKGID YFENSRRATL AQRAYGADNP NKWVGYSADI WGWTASDGPG YSKGRYSVNG TPRDFNGYMA RGVSAIRVVD DGTIVPTAAG GSIPFAPEVT IPALMTMRTT FGPRLYTRYG FKDAINPSFT FTDFGSKSGE VDPVHGWVAR DYIGIDQGPI LAMMENHRSG LVWKVMRRNR HIVRGLKRIG FTGGWLDQAQ PAKGE
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