Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0935 |
Symbol | |
ID | 4080488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 953089 |
End bp | 954375 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009296 |
Product | amidohydrolase |
Protein accession | YP_615986 |
Protein GI | 103486425 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.755972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACGCT TTCGACAGCG CCATCTGAGC GCTGCGCTCG CGACAAGTCT TTTGGCGGCA TCGCCGACGT CGGCCGAAAA TCTCTATATC GAGGCCGGAC GGCTGATCGA TGGCGTCTCC AGCGAGGTCC GTACCGGCCA GTGCATCACC GTCGAGGCCG AACGCATCAA GGCGGTGGCT CCATGCGGGC CGACGCCCGA TGGCGCGAAG CGGCTCGACT GGTCCGCCTT CACCGTCCTG CCCGGCCTGA TCGACCTCCA CACGCACCTA GCCGACCTCG GCCAGAGCGC CGACCTCGCC GCGCCGATCA AGGCGTCGCC CGCCGAAACC GCGCTCGTCG GCGCGCGCAA CGCACGCGTG ACGCTGGAAG CCGGATTTAC CAGCGTGCGC GATGTCGGCA CCTATCGCGG ACTCACCGAC GTCGCCTTGC GCAACGCGAT CGACCGCGGC GACGTGCCGG GGCCGCGCAT GTGGGTCGCG GGCGCCTATA TCACCATCCC AAAGGGCGGC GGCGAGCTCA ACGGCGTCAT CCCCAATGAG CAGCTACCGC CCGACATGCG GCTGGGCGTC GCCGTGACGT CCGAGGAAGC GGCGGAAAAA GCGGCCTTCC TTCTCGATCA AGGCGCCGAT TTCATCAAGA CGATCGCCAC CGGCGCGGTG CTCGCGATCG GCACCGAACC CGGCGCGCCC GAACTCACCG AGGATCAGTT GCGGGCGGTC GTCAGGGTCG CCCACGCCCG CGGCAAGCGG GTCACCGCGC ACGCCCACGG CGCCGAAGGG ATCAAGACCG CTATTCGCGC CGGGGTCGAC AGCATCGAAC ACGCCAGCGT CGCCGACGAG GAAGCGCTGC AACTCGCAAA AAAGCACGGC ACCTGGCTCG CGATGGATAT CTACAACGGC GACTATATCG ACGAAATCGG GACGAAGGAG GGCTGGCCCG CCGAATATCT GCGCAAGAAC CGCGAGACGA CCGACGCCCA GCGCGCCGCC TTTCGCCGCG CGGTCGAGCT GGGGGTCAAC ATCGGCTATG CCACCGACGC CGGCGTCTAT CCGCACGGAC TGAATGCGCG GCAATTCCGC AATATGGTTC AATATGGGAT GACGCCGATG CAGGCGATTC AGTCGGCGAC GGGCCACGCC GCCGAAGAAA TGGGCCGCAG CGACATCGGC GCGATCGTCC CCGGCCGCTA TGCCGATTTC GTCGCGGTAA AGGCCGACCC GCTCGCCGAC ATCACGGCGC TCGAGGCGAT CGATCATGTT ATGAAGGGCG GTGTGCTGGT ACGCTAG
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Protein sequence | MQRFRQRHLS AALATSLLAA SPTSAENLYI EAGRLIDGVS SEVRTGQCIT VEAERIKAVA PCGPTPDGAK RLDWSAFTVL PGLIDLHTHL ADLGQSADLA APIKASPAET ALVGARNARV TLEAGFTSVR DVGTYRGLTD VALRNAIDRG DVPGPRMWVA GAYITIPKGG GELNGVIPNE QLPPDMRLGV AVTSEEAAEK AAFLLDQGAD FIKTIATGAV LAIGTEPGAP ELTEDQLRAV VRVAHARGKR VTAHAHGAEG IKTAIRAGVD SIEHASVADE EALQLAKKHG TWLAMDIYNG DYIDEIGTKE GWPAEYLRKN RETTDAQRAA FRRAVELGVN IGYATDAGVY PHGLNARQFR NMVQYGMTPM QAIQSATGHA AEEMGRSDIG AIVPGRYADF VAVKADPLAD ITALEAIDHV MKGGVLVR
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