Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0892 |
Symbol | |
ID | 4082792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 899994 |
End bp | 900422 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638009253 |
Product | hypothetical protein |
Protein accession | YP_615943 |
Protein GI | 103486382 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.204366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTATG GCCCCGCGCG CCTGCTTCCC GGCGATCAGA TCCAGATCAC CACCAACCCC GATACCGAAC CTTTCTGGCA AGCGGCACGA GAGCACAGGC TTACGGCCTG TCAGTGCGGC GAGTGCGGCG CGTTCCGGAT GCCGCCCACG CCCGTCTGCC CCCATTGCGG CAGCCGGAAA AAGGACTGGC CGACGCTTCC GGGCACGGCG ACCGTCTTCA GCTATGTCAT TTGCAACAAG AATCCGAAGA CGGGGGAGGA TTTTGTCTAT GTTCCCGTGG TCGTCGATCT GGACGGTGCG CCGGGGGCGC GGCTCAACGC AAATGTCACC GGCTGCGATG CCGAAGAGGT GCATATCGGC ATGAAGGTTG CGGTCGAATG GACGCCGATT CAGGAGGATT GGGTGCTGCC CAATTTCCGC AAGGCCTGA
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Protein sequence | MVYGPARLLP GDQIQITTNP DTEPFWQAAR EHRLTACQCG ECGAFRMPPT PVCPHCGSRK KDWPTLPGTA TVFSYVICNK NPKTGEDFVY VPVVVDLDGA PGARLNANVT GCDAEEVHIG MKVAVEWTPI QEDWVLPNFR KA
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