Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2423 |
Symbol | |
ID | 4076905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2563205 |
End bp | 2564347 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007745 |
Product | peptidase M56, BlaR1 |
Protein accession | YP_614417 |
Protein GI | 99082263 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.906062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.563265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTG ATGCGCTTCT GAACTCTTAT ATCGACCTGA ACCTTCTGGT TTGTGCCGGC GCCCTGCTGT GGCTCGCCGC GCGTTGGGTT TTGCGACGAA CGGCTCTGGC GACCGCCTAT GGGCCGCAGC TGCGTTTGCT CAATGGGATG ACTGTCCTAC TGGCAGCCAT GCCGTTCCTT GTTGTCGCCC TCAATGCCAT CGGTATCGGT CACCCGCCCA CCCTCTCGGA TGTCCTCGTA TCCCAATATC TGCAAGGCAA TGTCGGCATG TCCGCAGTGC AGTTTGAATC GATGATTGGC CTGCGCGAAG ATCTGGTCCG AGACCTTGTT TACGGCGCAA CCTTTGGGAG CCGGGTTGCC ACTGTCTTTG TGGTGATCGG AACAGCTGTC TCGCTCTTTT TGCTGGGCTC CGCCATTCTG CGCCTGCACC GTGCATTGGC CTCCGCCTAT CGCTGGAAGC GCATTGGCCG CGTTGATCTG CTTTTGAGCG ACGATACCGC AGTGGCATAC TCCACCCGCG GCCTCTTTCG CCGGTATGTG GTGTTGCCGA CGTCGCTGCT GAATGACCCG CAAGATCTGC GCCTGACGCT GGCGCATGAG CTTCAGCATT TTCGCCAGAG GGATGTGGAA ATCGCCTTCC TGATGGAATG CCTGCGACCG CTCCTGTTCT GGAACCCCGC CTTCTATCTT TGGCGCCGCG ACATGCGGGC GGTCCGCGAA TATGCCTGCG ATCAGGCTCT TAGCACCAAG GGCCGCTTCG ACCCGCGCAG CTATTGCGAA TGTTTAATCC GCGCCACCGA ACGGGCGCGC AAATCCCCTG TCTTCCTCAG CCCGCGCAGC CCCTCTGTCG CCCTGCTTGA GCGTCGCGAA ATCTTGCATA CGCCCATGCT TGCACGCCGC ATCATCGCGG TTACCGAGCA GCCGCCACGC GGCCGGCTCG GGCTTGTCTG GGGAGGTGTC TCTACAGCCA TTGGCTGCGC CGTTATCGCA ACTGCCTTCC TGATCCAGCG CCCAACGGAC TGGAGCCACG ATCGGCTGAT GCTCTCAACA GTAGTCAATC TGGAGCGCAT GGCGCAGCGC AGTTCGAACC AGGTCGCCGG GCCGCAGTGG ACAAGCTCCA TTTTGATCCC CGCAGGTCGC TAA
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Protein sequence | MKADALLNSY IDLNLLVCAG ALLWLAARWV LRRTALATAY GPQLRLLNGM TVLLAAMPFL VVALNAIGIG HPPTLSDVLV SQYLQGNVGM SAVQFESMIG LREDLVRDLV YGATFGSRVA TVFVVIGTAV SLFLLGSAIL RLHRALASAY RWKRIGRVDL LLSDDTAVAY STRGLFRRYV VLPTSLLNDP QDLRLTLAHE LQHFRQRDVE IAFLMECLRP LLFWNPAFYL WRRDMRAVRE YACDQALSTK GRFDPRSYCE CLIRATERAR KSPVFLSPRS PSVALLERRE ILHTPMLARR IIAVTEQPPR GRLGLVWGGV STAIGCAVIA TAFLIQRPTD WSHDRLMLST VVNLERMAQR SSNQVAGPQW TSSILIPAGR
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