| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2420 |
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| Symbol | |
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| ID | 4076746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2561445 |
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| End bp | 2562242 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007742 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614414 |
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| Protein GI | 99082260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0828687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.714962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC GATCCATCGT CCCCATCGTC TATATTCTCT TCCTCATGCT GCCGATCTAT
TGGCTCGTGG CGATGAGCTT TAAGACCACA AATGAGATCC TCTCCGGTTT CTCGCTCTTC
CCGCAGACCT TTACGCTCGA AAACTACAAG GTGATCTTCA CCGACCCGAG CTGGTACTGG
GGCTACATAA ACTCGATCCT TTACGTGTCG ATCAACACGG TGATTTCCGT CGCGGTGGCG
CTGCCTGCGG CCTATGCCTT CTCGCGCTAT CGGTTCTTGG GCGACAAGCA GCTGTTCTTC
TGGCTCTTGA CCAACCGGAT GGCCCCGGCC GCCGTTTTCG CCCTGCCCTT CTTTCAGCTC
TATTCGGCTG TGGGGCTCTT TGACACGCAT CTGGCTGTGG CACTGGCGCA TTGCCTCTTT
AACATTCCGC TGGCGGTCTG GATCCTCGAG GGCTTCATGG GTGGCGTGCC GAAAGAGCTG
GATGAGACGG CCTATGTGGA CGGCTATTCC TTCCCGCGCT TCTTCGTGTC GATCTTCTTG
CCCGCCATCA AGGCTGGCGT GGGCGTGGCG GCGTTCTTCT GCTTCATGTT CTCCTGGGTG
GAGCTCTTGC TGGCAAAGAC CCTGACGGCC GTGGCTGCAA AGCCCATCGC GGCCACCATG
ACAAAGACCG CATCCTCTGC GGGCTATGAG CTGGGGCTTT TGGCAGCCGC AGGCACCTTG
ACCATCATTC CGGGCGCCAT CGTGATCTAT TTCGTCCGCA ACTACATCGC GAAGGGCTTC
GCGATGGGGA GAGTTTGA
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| Protein sequence | MQKRSIVPIV YILFLMLPIY WLVAMSFKTT NEILSGFSLF PQTFTLENYK VIFTDPSWYW
GYINSILYVS INTVISVAVA LPAAYAFSRY RFLGDKQLFF WLLTNRMAPA AVFALPFFQL
YSAVGLFDTH LAVALAHCLF NIPLAVWILE GFMGGVPKEL DETAYVDGYS FPRFFVSIFL
PAIKAGVGVA AFFCFMFSWV ELLLAKTLTA VAAKPIAATM TKTASSAGYE LGLLAAAGTL
TIIPGAIVIY FVRNYIAKGF AMGRV
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