| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2381 |
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| Symbol | xerC |
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| ID | 4076500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2501509 |
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| End bp | 2502444 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007703 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_614375 |
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| Protein GI | 99082221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCGG GCGACCCGAC GCTGATCTCT CCGGCGGCGC GCGATGCGTT GCAGCGCTGG
CTGGACGGTC TCGGTGCGCT TGAAGGCGCG GCGGACAATA CGCTCGCGGC CTATCGCGGC
GATGTCGTGG AGTTCCTGTC GTTCATGAGC CTTCACTTTG GCGCCCCACA GGGACTTGGC
GCCCTGCGCC AGATCACCAC CGCGGACATG CGCGCCTGGA TGGCCTCGGC GCGGTCGTCG
GGCACGGGCG CGCGCTCTCT CGCACGCAAA CTCTCCGCTG TGAAAAAATT CTACGGCTGG
CTGGCCAAGC GCGAAGGGTT CGAACCCACG GCCGTTTTGT CGACCCGCGC GCCCAAGTTC
CAAAAGAAAT TGCCCCGCCC GCTTGATCAG GACGCTGCGC GAGCAATGAT CGACACGGTC
GAGTTGCAAT CACAGAAGGA CTGGGTGTCG GCGCGAGATG TCGCGGTTGT AACACTCCTC
TATGGATGTG GCCTGCGCAT CTCCGAGGCA CTCGGCCTTC TTGGCAAAGA CGCTCCCCTG
CCAGCCACAC TTCGGATAAA AGGCAAGGGC GGCAAAGAGC GGGTGGTGCC GGTCCTGCCT
GCGGCGCAAC AGGCGGTAGA GCGCTACTTG GCCCTCTGCC CCCACCCCAA AGAAGCCCAT
CTGCCCTTGT TTCGCGGCGT CCGTGGCGGC GCGCTGCATG CCCGCATGAT CCAGGGCGTA
ATGGCAGGCG CGCGTCGGCA GCTGGGTCTT CCCGCAACAG CAACCCCGCA TGCCCTGCGC
CACAGCTTTG CAACGCATCT CCTTGAGGCT GGGGGCGACT TGCGCGCCAT TCAAGAGCTT
CTGGGTCACG CGTCCCTGTC GACCACGCAG GCCTACACCG CGGTGGATAC GGCGCATCTC
ATGGAAGTCT ACGCCCGCGC CCACCCGAAG GCCTGA
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| Protein sequence | MSAGDPTLIS PAARDALQRW LDGLGALEGA ADNTLAAYRG DVVEFLSFMS LHFGAPQGLG
ALRQITTADM RAWMASARSS GTGARSLARK LSAVKKFYGW LAKREGFEPT AVLSTRAPKF
QKKLPRPLDQ DAARAMIDTV ELQSQKDWVS ARDVAVVTLL YGCGLRISEA LGLLGKDAPL
PATLRIKGKG GKERVVPVLP AAQQAVERYL ALCPHPKEAH LPLFRGVRGG ALHARMIQGV
MAGARRQLGL PATATPHALR HSFATHLLEA GGDLRAIQEL LGHASLSTTQ AYTAVDTAHL
MEVYARAHPK A
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