| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2365 |
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| Symbol | tolB |
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| ID | 4076484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2486763 |
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| End bp | 2488088 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007687 |
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| Product | translocation protein TolB |
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| Protein accession | YP_614359 |
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| Protein GI | 99082205 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACG CAATTGCGAC AGTACTCCTT GGCCTTGCAA TGCTGCTGCC CGTTGGGGCG
GTGCAGGCAC AGGATGGGCC GCTCCGGATC GAGATCACGG ATGGTGTGAT CGAACCGTTG
CCCTTCGCGG TGCCCGATTT CATCGCCGAC ACCCCGGCAG CGGCGCAGTA TGCGACGGAC
ATTGCCCGTG TGATCGCCCA GGATCTTGTG GGCTCCGGGC TGTTTCGCGA AATTCCCAAG
GTCGCCTATA TTTCGCCCTA CACCGATTTT GACGCTGAGG TGAATTTCAC CGACTGGAAG
GCGATCAACG CGCAGGCGTT GATTGCAGGC GCGGTGAGCC TGTCGGGCGA TCGCATCACC
GTGCGCTTTC GCGGCTATGA CGTGTTCGCC GGGCAAGAGC TTGGCGCGGG GCTTCAGCTT
TCGGGCACGA CCGACGGCTG GCGGCGTATC GCGCATAAGG TGGCCGATAC GATCTATTCT
CGCCTGACCG GCGAAGGTGG CTATTTTGAC AGCCGCGTCG TGTTTGTTTC GGAAACCGGC
CCCAAGAATG ACCGCAAGAA GCGCCTTGCG ATCATGGATT ACGATGGGGC CAATGTGCAG
TATCTGACCA ACTCGGACGC CATTGTGCTC GCGCCCCGGT TCTCGCCCAC CGGCGACCGC
GTGCTTTATA CCAGCTATGA GAGCGGCTTT CCGCAAATCC ATGTGCTGGA TGTCGGCCGC
GTGCAGCGGC GGGTATTGTC GGCGGGCAAT GGCTCCATGA GCTTTGCGCC GCGTTTTGCC
CCCAACGGCC AGACGATTGT CTACTCGCAG TCTCAAGGCG GCAATACCGA CCTCTTTTCC
ATGGACATCA ACTCTGGCAA CCCGCAGCGC CTGACCAGTG CGCCGTCGAT TGAAACCGCC
CCGTCATTCT CGCCCGATGG CAGCCAGATC GTGTTTGAGA GCGACCGCTC CGGGACATCG
CAGCTCTATG TGATGTCTGC GTCGGGTGGA GAGGCCAAGC GGATCAGTTT TGGTCAGGGG
CGCTATGGCA CCCCAGTCTG GTCGCCGCGT GGCGACTACA TCGCCTTCAC CAAGCAGAAC
GCGGGCCGGT TTCATATTGG CGTGATGCGC ACAGATGGTA GCGAGGAACG CCTGCTGACG
GCGTCCTTTC TTGACGAGGG TCCCACATGG TCGCCCAATG GTCGGGTGAT CATGTTCACG
CGCGAAACCC AGGGGGCCAG CGGTCAGGCG CGGCTCTATT CGGTGGATAT TTCAGGTCGC
AATCTGAAGC CGGTCAAGAC GCCGGATGGG GCGTCTGACC CCTCCTGGTC CCCTCTGCAG
AACTGA
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| Protein sequence | MRNAIATVLL GLAMLLPVGA VQAQDGPLRI EITDGVIEPL PFAVPDFIAD TPAAAQYATD
IARVIAQDLV GSGLFREIPK VAYISPYTDF DAEVNFTDWK AINAQALIAG AVSLSGDRIT
VRFRGYDVFA GQELGAGLQL SGTTDGWRRI AHKVADTIYS RLTGEGGYFD SRVVFVSETG
PKNDRKKRLA IMDYDGANVQ YLTNSDAIVL APRFSPTGDR VLYTSYESGF PQIHVLDVGR
VQRRVLSAGN GSMSFAPRFA PNGQTIVYSQ SQGGNTDLFS MDINSGNPQR LTSAPSIETA
PSFSPDGSQI VFESDRSGTS QLYVMSASGG EAKRISFGQG RYGTPVWSPR GDYIAFTKQN
AGRFHIGVMR TDGSEERLLT ASFLDEGPTW SPNGRVIMFT RETQGASGQA RLYSVDISGR
NLKPVKTPDG ASDPSWSPLQ N
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