Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2108 |
Symbol | |
ID | 4077859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2212779 |
End bp | 2213840 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007427 |
Product | hypothetical protein |
Protein accession | YP_614102 |
Protein GI | 99081948 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGG GCTTTCGAGG CACGTTTGTC ATCTCTTGGA CGCAAACGGA AATTGATGGG CTCGATGCTG CACCTGTTGC GGCACTCGAC GTGGGAGCCG CGTGGTCATG GCATGGCGAC GCCCTGCGCG TGGATGGACC CTCAGAGCTG CTGCGTCTGG ATATGGCAGA TGGAGAACAG GACCTCCGAC GCCGTGCAGC GCGCACGGTA AGACGCCTTG TGGGCGCTGC CGTGCAGAAT CGCAGCGATG TTCATGCGAT CGAGATTGAC GATCCTGTGT CCGACAGCAG TTTCATTGTC ACCAACGGCG TGCAGAGCTA CACCGTGACG GTGATCGAGG CGGGGCGTGG ACGTCCGCCA CTCTTGATGT TTGTCGATGA CATTCCGCCG CGCAACACGG ATCTCTGGGT GGTCCATCAC GCGCTTGGCT ACATGGGCGC GGACCAAGCT CCACAGAACC CGGGGGTAAT CTGTTTCACC CCGGGCACGC GCATTGCCAC CCCCGAAGGG CCAAAGCCCG TCGAAAGCCT GCGCGAAGGC GACCGGGTTC AGACCCGCGA CAACGGCGCC CAGGTCGTGC AATGGATCGG GGCGCGCCGA ATGAGCGGTG CGCGTCTCTT TGTGATGCCC GCGCTGCGTC CGGTCCGCAT CCGCGCCGGA GCCCTGGGCA TTGACCGCCC GGAGCGCGAA TTGCTGGTCT CGCCAGAGCA TCGGATGCTT GTGCGTGGTG CGGCGGCACG GGCGCTGTTT AACGAATCCG AGGTGTTGGT GGCGGCGCGG GATCTCATCA ACGGGCATAC CATTGATGTG GACACCACCG TGCGCGAGGT GACTTATGTC CACCTGCTGC TGGAACAGCA CCAAGTGATC TGGGCCAATG GCGTCGAGAC CGAGAGCTTC CACCCCGCCC ATGCAGCCCT TTCCGCGCTT GATGATAAGG ATCGCAAGCG CCTGTTGCGC AGATTGCCTG CGATTGAGCA TGACCCCGCA AGCTACGGGG CATTTGCGCG GCGCAATCTG TCAGCCTCTG AGGCTGCGAT TCTCAGACAT AGCGCAGCCT AA
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Protein sequence | MKTGFRGTFV ISWTQTEIDG LDAAPVAALD VGAAWSWHGD ALRVDGPSEL LRLDMADGEQ DLRRRAARTV RRLVGAAVQN RSDVHAIEID DPVSDSSFIV TNGVQSYTVT VIEAGRGRPP LLMFVDDIPP RNTDLWVVHH ALGYMGADQA PQNPGVICFT PGTRIATPEG PKPVESLREG DRVQTRDNGA QVVQWIGARR MSGARLFVMP ALRPVRIRAG ALGIDRPERE LLVSPEHRML VRGAAARALF NESEVLVAAR DLINGHTIDV DTTVREVTYV HLLLEQHQVI WANGVETESF HPAHAALSAL DDKDRKRLLR RLPAIEHDPA SYGAFARRNL SASEAAILRH SAA
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