| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2103 |
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| Symbol | |
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| ID | 4077854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2208354 |
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| End bp | 2209778 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007422 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_614097 |
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| Protein GI | 99081943 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTG ATGAGTTCAA AACGTCGATC AAAAACACAG CGGACGCGGG GCAACTGGCC
GCGACATTGA TTGGCGAAGG GGTCATGATC CCCGGCCTCA GAGGTGATGT GCCGCTGGTC
TATGCAGACT ATGTGGCCTC TGGGCGCGCG ATGCGCCCAG TCGAAGACTT CATTGCCGAA
AAGCTCCTGC CGTTTTATGC CAACTCGCAC ACCGAAGCGT CCTATTGCGG GCAGTATGTG
ACCCGGATGC GGCGTGAGGC GCGGGCAGAA ATCGCGCGGC TGACGGGTGC GGGGGACGAC
TGCGAGGTGA TCTTTGCAGG CTCCGGTGCC ACGGCGGGTT TGAACCGGTT GGTGAAGCTT
TTGGGGATTG AAGAGGCCAC GCGCCCGGTT GTGTTTATCG GCCCCTATGA GCATCACTCC
AACATCCTGC CGTGGCGCGA GAGCCGCGCC GAGGTGGTCG AAATCCCCGA AGGCCCTGAT
GGCGGCGTGG ATCTCGCAGC CCTCGAGGCG GCCTTGGTTG CGCATGCGGA GGCGGATCTG
AAGATCGGCA GCTTCTCGGC GGCGTCGAAC GTGACGGGGA TCATCACCGA TCCCGACCCG
GTCACGCGGC TGTTGCGCGC GCATGGCGCA CTTGCGGTTT GGGACTATGC CGGGGGTGGG
CCCTATCTGC CCATCGACAT GGGCGCGCAT GGCGCCGAGC CTAAGGACGC TGTTGTGGTT
TCGCCGCACA AATTTCCGGG CGGGCCGGGG GCCTCTGGCG TTCTGGTGCT GCGCCGCGAT
GCGGTGCGGG CGCAAAACCC CTCATGGCCA GGGGGGGGCA CGGTGAGCTT TGTCTCGCCT
TGGTCGCATC GCTACGCTGA CAGTCTCAGC GCGCGAGAGG AAGCCGGCAC GCCCAATGTG
GTGGGTGACA TTCGTGCGGC GCTGGCGTTT TTGGTCAAGG AAGCCGTGGG GCAGGAGCAG
ATCGAGGCCC GCGAGGCGCA GTACGCTGCA AAGGCGCGCG CGGCCTGGGC GGATGTGCCG
GGGCTGACGC TTCTGGGGCA CGCGCATGCC CACCGGCTGC CGATCTTTTC CTTTACCGTG
GAAGGGGCCT CCGGTGCGCC GGTGCATCAG CAACTCTTCA CCCGCATGCT CAGCGATGTT
TATGGCATTC AGGCGCGTGG TGGATGCGCC TGCGCGGGAC CTTATGCACA CCGGCTGCTT
GAGATCGACG AGCCTCAGTC TGAGGCCCTG CTTAGGGATC TTCTTGCCGG ACGGGAGCTG
CAGAAACCGG GCTGGGTGCG GTTGAACTTC TCTTACCTGA TGGCCGAAGA GACCGTGGAT
TATGTGATCG AGAGCGTGAA GGCGCTGGTG CTGGAGGCCG AAAATGTCGC CTCTGCTTAT
GATGCGGATC CGAGCACCGC GCGCTTTCAG CCACGGGCAG CCTGA
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| Protein sequence | MIFDEFKTSI KNTADAGQLA ATLIGEGVMI PGLRGDVPLV YADYVASGRA MRPVEDFIAE
KLLPFYANSH TEASYCGQYV TRMRREARAE IARLTGAGDD CEVIFAGSGA TAGLNRLVKL
LGIEEATRPV VFIGPYEHHS NILPWRESRA EVVEIPEGPD GGVDLAALEA ALVAHAEADL
KIGSFSAASN VTGIITDPDP VTRLLRAHGA LAVWDYAGGG PYLPIDMGAH GAEPKDAVVV
SPHKFPGGPG ASGVLVLRRD AVRAQNPSWP GGGTVSFVSP WSHRYADSLS AREEAGTPNV
VGDIRAALAF LVKEAVGQEQ IEAREAQYAA KARAAWADVP GLTLLGHAHA HRLPIFSFTV
EGASGAPVHQ QLFTRMLSDV YGIQARGGCA CAGPYAHRLL EIDEPQSEAL LRDLLAGREL
QKPGWVRLNF SYLMAEETVD YVIESVKALV LEAENVASAY DADPSTARFQ PRAA
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