| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1893 |
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| Symbol | |
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| ID | 4077390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1994121 |
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| End bp | 1994861 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007209 |
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| Product | hypothetical protein |
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| Protein accession | YP_613888 |
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| Protein GI | 161899028 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.519482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.766951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCC ATTCCAAATG GGCAAACATC CAGCACCGTA AAGGTCGCCA GGATGCTGCG
CGGTCCAAGC TCTTCTCCAA ACTTTCCAAA GAAATCACCG TCGCCGCCAA AATGGGCGAC
CCGGACCCTG AAAAGAACCC GCGCCTGCGC CTTGCTGTGA AGGAAGCCAA GTCGAACTCC
GTGCCCAAGG ACGTGATCGA CCGCGCCATC AAGAAGGCGA CCGGGGGCGA TGCGGAGAAC
TACGACGAGA TCCGCTACGA GGGTTACGGC CCCAATGGTG TCGCAGTGAT CGTCGAGACC
ATGACCGACA ACAAGAACCG CACCGCCTCC ACCGTGCGCT CGACCTTCTC CAAGAACGGC
GGCAACCTCG GTGAAACCGG CTCTGTCGGC TTCATGTTCG AACGCAAGGG CGAAGTGACC
TATCCAGCCT CTGTGGGCGA TGCGGACACG GTGATGATGG CCGCAATCGA AGCGGGCGCC
GAGGATGTGG AAAGTTCTGA AGACGGGCAT GTGATTTTCT GCGCGGATAC CGACCTCAAC
GAGGTGTCCA ACGCGCTTGA GGCGGAGCTT GGCGAATCCG AGAGCACCAA GCTGATCTGG
AAGCCCACCA CCACCACCGA GCTTGATCTC GAAGGCATGC AAAAGCTGAT GAAACTGGTG
GATGCGCTGG AAGACGACGA TGATGTGCAG CGCGTGACCA CCAACTTTGA GGCCTCCGAC
GAGGTGATGG CCCAGCTCTG A
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| Protein sequence | MAGHSKWANI QHRKGRQDAA RSKLFSKLSK EITVAAKMGD PDPEKNPRLR LAVKEAKSNS
VPKDVIDRAI KKATGGDAEN YDEIRYEGYG PNGVAVIVET MTDNKNRTAS TVRSTFSKNG
GNLGETGSVG FMFERKGEVT YPASVGDADT VMMAAIEAGA EDVESSEDGH VIFCADTDLN
EVSNALEAEL GESESTKLIW KPTTTTELDL EGMQKLMKLV DALEDDDDVQ RVTTNFEASD
EVMAQL
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