Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1749 |
Symbol | |
ID | 4075813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1842361 |
End bp | 1843008 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638007063 |
Product | methyltransferase type 12 |
Protein accession | YP_613744 |
Protein GI | 99081590 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.110719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTT CTTCAAAGGA TGCCGCGTTC TGGAGCAAGA TCTCGCGCAA GTATGCGGCG GACCCGATCC GCAACATGGA CGGCTATCTG CAAACGCTTG ATCGCACAAA ATCCTACCTG AAGCCGGAGG ACCATGTGCT CGAGATCGGC TGCGGCACGG GATCGACCGC TTTGCTGCTG GCGCCGCATG TTGCGCATAT CACCGGCACG GATCTGGCAC CGGGCATGAT CGAAATTGCT GCCGAGAAAC GTGCGAAAGA AGGGCTCGAA AACGTGACGT TCAAAGTGGC CGAGACGCTC GACCACAACC CTCAGGACGG CGCCTATGAC GCCATTTTGG CGCATAACCT GCTGCATCTG TTGCATGATC TTGATCAATC GCTGCAGCGG ATCGCTGCGC TGACCAAAAC CGGCGGGGTC TTTATCTCAA AAACTGTCTG CGCCCCAAAA GCCGGTGGCA TCAAATACGC GCTCATTCGT GCGCTCGCGA TCCCGCTGAT GCAGCGGATC GGAAAAGCGC CCTATGTGAA TTTCATTTCG GTGCCGGACC TTGAGCGTCG TATTGAACGT GCCGGATTCG AGATTTGCGA GGTGATTTCC CAGCCCGGAC TGATGCAGAG CCACTATGTT GTGGCGCGCA AACTCTAA
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Protein sequence | MAASSKDAAF WSKISRKYAA DPIRNMDGYL QTLDRTKSYL KPEDHVLEIG CGTGSTALLL APHVAHITGT DLAPGMIEIA AEKRAKEGLE NVTFKVAETL DHNPQDGAYD AILAHNLLHL LHDLDQSLQR IAALTKTGGV FISKTVCAPK AGGIKYALIR ALAIPLMQRI GKAPYVNFIS VPDLERRIER AGFEICEVIS QPGLMQSHYV VARKL
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