| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0953 |
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| Symbol | |
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| ID | 4077347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1017303 |
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| End bp | 1017926 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006256 |
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| Product | multiple antibiotic resistance (MarC)-related proteins |
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| Protein accession | YP_612948 |
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| Protein GI | 99080794 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.838216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATA CCGCGTTTCT GATTACCTCT TTTGTGACGC TATTTGTGAT CATCGACCCG
ATTGGATTGA TGCCGGTGTT CCTGGCCCTG ACCCAAGGCA TGACCAGCAA GCAGCGCCGC
GCCATTGCCA TTCGCGCCTC GATCACCGGT ATTGGCATCC TTGCGGTTTT TGCGCTCTTT
GGCGAAAGCG TTCTGGGCTT TATCGGCATC TCCATGCCGG CATTCCGTGT GGCGGGTGGT
ATCCTGTTGT TCCTAACCGC GCTCGACATG CTCTTTGAAC GCCGCACGGC CCGTCGTCAG
CACCAGGGCG ACGAGATTGC GCCCGAGGAT GACCCTTCGG TCTTTCCAAT GGCGATTCCG
CTGATCGCGG GGCCCGGCTC CATTGCGACA GTGATCCTTC TGACCGGGCA GCACCCCGGT
ATCGAAGGGT TTGCCTCGGT CATGGCCATC GTTGTTGCGG TCATCGCATT GATGCTTGGG
ATGTTTTCCA TCTCCGGCGC ACTGGAACGC CTGCTCGGCC CCGTGGGCAT CAATGTCGCG
ACACGCCTTT TGGGGATGCT TCTCGCGGCA CTCTCTGTGC AATTTGTCCT CGACGGGCTG
AGCGCTTTTG GTTTTGCCAG CTAG
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| Protein sequence | MIDTAFLITS FVTLFVIIDP IGLMPVFLAL TQGMTSKQRR AIAIRASITG IGILAVFALF
GESVLGFIGI SMPAFRVAGG ILLFLTALDM LFERRTARRQ HQGDEIAPED DPSVFPMAIP
LIAGPGSIAT VILLTGQHPG IEGFASVMAI VVAVIALMLG MFSISGALER LLGPVGINVA
TRLLGMLLAA LSVQFVLDGL SAFGFAS
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