| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0912 |
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| Symbol | |
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| ID | 4076282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 973041 |
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| End bp | 975563 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006215 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_612907 |
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| Protein GI | 99080753 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CCGATGCGCC GCAGCCAATA AAGGGTCGCC CCATGTCCAA GTCCCCTGAC
GCCTTTCGCA CCATCAGCGA GGTAGCAGAA TGGCTGGATG TACCGGCGCA TGTGCTGCGG
TTCTGGGAAA GTAAGTTCAC GCAGGTCAAA CCCGTCAAAC GCGCCGGTGG ACGGCGCTAC
TATCGCCCAA CGGATATGTT GCTTCTGGGC GGTATTCAGC ACCTCCTGCA CGAAGAAGGT
CTGTCGATCA AAGAGGCACA AGCCCTGTTG CGCGAAGAGG GCATCCAGCA TGTGCAGTCG
CTCTCCAAGC CGCTCGACGG CGACCAAGAG GACGAATCAG CGATTGAGGC CAAACCAGCG
AGCAAATGGG TTGAGCCATC TGAGGTCGAA AAGCCCAAGG CCCCGCTGGT AGACCGCGAT
CCCCCCGGCG CCGAAGAGCA ATCGGAGCGC AAAGCGGCTC CGCCACCGCC ACCGCCCTAC
CCCGCAACCC CGCCCGCGCC GACCGCTCCC GTGACGCCTG CAGCGGCTAC GCCCCCCGTT
GCGCCGGGCG ACAGCATGGC CCCGCCTCAG GGCCAGACAC CCGCAGCCGC CTCTGCAAAT
GCATCCAGCG CGGCAACATC TGCCCCGGCG GAGAACGTAG CTTCCTCGGG GCCTGCCGAG
AGCCCGGCGT CCACCGAGAC CCCGTCCCAG CCTACGACTC CTCCTGCGGC ATCCCCTTCA
CTGGGGGCGG AGGCTGGCGC TGGTCAGGAC GCGGACGCGG CCCCACTGGG CACACCGCCT
TCTGTACCGC CTGCCGCGCC GTCGCCTGCG CCCGCTGACG CAGGACCAGC CACGCCGCCC
GCGCAAACGC CGCCTGCCGC TCCTGCTTCC TCCGCTGCCC CCTCGGAGGC CGCCGCCGCA
TCTTTGCACC AAACACCGAG TGAGTTTGCC CCCACCAGCG ATACTGCGCC AGCCGTGCGC
AGCCCTTCCA CACCGGAAGG CGCTGCTGAG GATAGTGCGC CACAGGAAGG CGATCACGCG
CGCGCCCATG TGGGCGGCGC GCAGACGCCG CAGACATCCG CAGGTCAAAT GGCGATGCCC
ATGGACCTTC CAAATGCCGC CGCACCGCAA CGGGATATGG CCTCACAGGC CCAGGCCGTG
CGTGCGGCCA CAACACCTTC CTCTGCCACT GTTGCCCCCT CTTCGGCATC GAATTCCGAC
CAGCAGGATT TCTTTGCCGC AGCCGCAGAT GCGCAAAACG CCGGGCAAGC ACCGGCGTCC
GACAGCGCAG CTGTTGCCTC CGATCCGCCT GCGCCTAACC CAACTCAGCC CGCCCCGGCG
CAGCCTGATC CACTGGCGCA ACAAGAGTCA CAGATGTCCG CGCCGCCTGT CGGGACGCCC
CCTGCCGAGG ATCTGGTTGC AGAGGCACCG GTTGCGGATG CACCTGCGGA CGATCTCGCA
GGCGATCCCG TCGCGGATCA GGCGGAGACA GTTCACGGAT CTGCAACCGA TGCGGAGTCG
ACAGAGGCTG TTTCTAAGGG ATCAACCGCG CCGGTTGCAG ACGCGCGCCC CGCCAACCTT
ACGTCTGACC AGATTTCAAC CGAGGTCTCT TTTACAGGAG AAGCACCGCA GCAGATGGCG
GCTCAGGCGT CAGCGCCAGA TGCTCTCTTC GCCGGGACGA CGCAAGAACC CGATACGGTT
CAAGCATCTG ATTCTGTGAC TGAAACCCCC GAGGCCTTGC AACCCATTGA GGGCAGTGCA
GGCGTCGACG AGACGGCGAT CCAATCTCTT GCCTCGGACG ACCCCAGTTC TGAGCCCGCA
CTGGACGCGC CCGCATTCGA CTCGCCGGGC TCTCAACACC CGCCCGCCGA CGAACCCGCG
CCTGTTCAAC CTGTCTCCGA CGAGCCAGTG TCTTCGGACT TGGCGGCCAT AGAGGAAACA
AACGCCGATC CGGCAGCGCA GATGGCCAGC GCCCTGGCAG AGGCCACCGC TCCCGTGGCT
GAGACCACCG AATCCGCTCC CTCAGATGTC GACATCACGG GCGCGGACGA TAGCGATGTG
TCCGCAGTAG AAGAACCCGC GTCTGAGATG CCTCACGCCG AGGTCGAGGC GTCCGATTCG
CATACCGAAA CCTCGGATCA GGATCCCGCC CCCGCATTGG ATGTGACCGA TGCGATGACG
GACACCGCAG CCGAGGCCGC ACCAGAGGCA GACCCGCAGT CCGCGCCTGA TGCAGGCCCC
TTTGAGGACA ATGCGGAGAC CGCCGAAGAA CGTGACGCCG CTGCCCCGGT CACAGATGAG
GCCGAAGACG CCGCAGCCCT GGATCAGTTC CCAGAGACAG AGCGCACACC TTTGGCGGCT
GACTCGACGC CCACAGCGGA GTCGCCGCGC CCGCGGGTGA TCGAGGTTTC CGACACCCCT
GAGGGCAGCT TTGCCGCCGG ACCTCTTCAG CGCCTCTCGC GCCTCGGTAC ACTGACGGCA
GCGCAACAAG GCGCGTTGCG CGAGATTGCA ACCGCTTTGC GCGAGATCGC CTCCCGGCAC
TGA
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| Protein sequence | MRKTDAPQPI KGRPMSKSPD AFRTISEVAE WLDVPAHVLR FWESKFTQVK PVKRAGGRRY
YRPTDMLLLG GIQHLLHEEG LSIKEAQALL REEGIQHVQS LSKPLDGDQE DESAIEAKPA
SKWVEPSEVE KPKAPLVDRD PPGAEEQSER KAAPPPPPPY PATPPAPTAP VTPAAATPPV
APGDSMAPPQ GQTPAAASAN ASSAATSAPA ENVASSGPAE SPASTETPSQ PTTPPAASPS
LGAEAGAGQD ADAAPLGTPP SVPPAAPSPA PADAGPATPP AQTPPAAPAS SAAPSEAAAA
SLHQTPSEFA PTSDTAPAVR SPSTPEGAAE DSAPQEGDHA RAHVGGAQTP QTSAGQMAMP
MDLPNAAAPQ RDMASQAQAV RAATTPSSAT VAPSSASNSD QQDFFAAAAD AQNAGQAPAS
DSAAVASDPP APNPTQPAPA QPDPLAQQES QMSAPPVGTP PAEDLVAEAP VADAPADDLA
GDPVADQAET VHGSATDAES TEAVSKGSTA PVADARPANL TSDQISTEVS FTGEAPQQMA
AQASAPDALF AGTTQEPDTV QASDSVTETP EALQPIEGSA GVDETAIQSL ASDDPSSEPA
LDAPAFDSPG SQHPPADEPA PVQPVSDEPV SSDLAAIEET NADPAAQMAS ALAEATAPVA
ETTESAPSDV DITGADDSDV SAVEEPASEM PHAEVEASDS HTETSDQDPA PALDVTDAMT
DTAAEAAPEA DPQSAPDAGP FEDNAETAEE RDAAAPVTDE AEDAAALDQF PETERTPLAA
DSTPTAESPR PRVIEVSDTP EGSFAAGPLQ RLSRLGTLTA AQQGALREIA TALREIASRH
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